Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02688 ATGCATGGTGACAGGCCAAAGCCTACAGCCCTAGTGCACTTGTGTTCGGAGTTGCCACTTCGCAGGGGAACCCTCTTGAACCCCAAGGTAGCGTGTCTTGGAAGGCCACGGAGGGTGTATTCCAAGGTGGTGATCATAGACTCTCCCATTGATGTTATTTTTCGTACCAGGGGATACATGCCCTGGATAGGAAGTACTTTCAAGGAAACATGCACCTATTATGAATACAACAACAAGAGACCTGGTGCTAACACTGTTGCTAGAGTCACATGGCCAGGTGTTAAAACCGTAACACCTTGTGAGGCTGCTGATTATTATCCAGGGAGGTCTTATGGACTCGCTAATTCGACTCAACGTGATGCTTGGATTGTCGAGTCTGGGGTCCCTTACGTTCTAGGATTCCTTCCCAACCTTCTCGTCCCAACAAAGTCGCTGACATCGTTGATAACAAGGACGCCGTTTCCAGGCTCCAAGTCATTGCTCGTGCTGGATGAATCTGACTGCATGGCATCGGGAGCACAGCAAGCTTTGAGAAGGACAATGGAGATATATTCTAATTCTGTTTGTTTTGCTCTCGTTTGCAATACATCTCCTAAGATCATTGAACCGATTCAAAGCAGATGTGCCATTGTGCGGGTTTCACGCTTATCTGATCAAGAGATATCGGATCGCCTCATGGTTGTGGTTCAAGCAGAGAAGGATCATTTTCACCGCTGA 717 0.477 MHGDRPKPTALVHLCSELPLRRGTLLNPKVACLGRPRRVYSKVVIIDSPIDVIFRTRGYMPWIGSTFKETCTYYEYNNKRPGANTVARVTWPGVKTVTPCEAADYYPGRSYGLANSTQRDAWIVESGVPYVLGFLPNLLVPTKSLTSLITRTPFPGSKSLLVLDESDCMASGAQQALRRTMEIYSNSVCFALVCNTSPKIIEPIQSRCAIVRVSRLSDQEISDRLMVVVQAEKDHFHR* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02688 238 Gene3D - 141 214 IPR027417 -
Rops2g02688 238 SUPERFAMILY Pectin lyase-like 32 131 IPR011050 -
Rops2g02688 238 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 153 234 - -
Rops2g02688 238 Pfam DNA polymerase III, delta subunit 144 216 - -
Rops2g02688 238 Gene3D - 21 136 IPR012334 -
Rops2g02688 238 Pfam Pectinesterase 30 106 IPR000070 GO:0030599|GO:0042545
Rops2g02688 238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 234 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02688 Rops-Chr2 45053063 45053779 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02688 155 233 Core DNA Replication Machinery Family AT1G63160 73.418 7.96e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02688 K10755 K01051 gmx:100800194 162.155