Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02687 ATGGAGCACCTTATATTTCTTGCGGAGGTGCCACTCAATCCCGAGGCCAACAAGGAGAAGGTGACCCAAGTTACGTTCGAGACTTTCAATGTGCCTGCCATGTATGTTGCGGTTCAGGCTGTCTTGTCTCTGTATGCCAATGGACGCACTACAGGTATCGTGCATGATTCCGGAGTTTTGAGAAGTTCCCTAGAAAGCAAAGATATATTGGGAGATGGTTATGAAAGTGATGTTCTTGGGGAGTCCACGCCAGATGCTGTAATCAGTGGGTTTATGAAAGGTGAGAAAGAGCTTATTGAGGAGTTGTTGCAAACTGAAATAAATATGTCCCGCTGGGAGTGCTCTCATGCAGCATATGGAGGATTTCTAGAGAATGTAAGATCAAATTACCAAGCTGTCTCAAGACCAGAACAAGATGAGGCCAGCAAGGGTTCATTGTCGCGAGGCCTGTAG 453 0.4636 MEHLIFLAEVPLNPEANKEKVTQVTFETFNVPAMYVAVQAVLSLYANGRTTGIVHDSGVLRSSLESKDILGDGYESDVLGESTPDAVISGFMKGEKELIEELLQTEINMSRWECSHAAYGGFLENVRSNYQAVSRPEQDEASKGSLSRGL* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02687 150 Pfam Actin 2 63 IPR004000 -
Rops2g02687 150 SUPERFAMILY Actin-like ATPase domain 2 54 IPR043129 -
Rops2g02687 150 Gene3D - 2 39 - -
Rops2g02687 150 PRINTS Actin signature 17 30 IPR004000 -
Rops2g02687 150 PRINTS Actin signature 42 61 IPR004000 -
Rops2g02687 150 PANTHER ACTIN 2 58 IPR004000 -
Rops2g02687 150 Gene3D - 40 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02687 Rops-Chr2 45052042 45052674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02687 2 58 Cytoskeleton Gene Families AT5G09810 77.193 1.28e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02687 - - vum:124841048 108.997