Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02681 ATGTCAGGAACTCCGGCGGGAGCGTTCAGGCTCCGATGGGACGTGTTCCTGAGCTTCAGAGGCGAAGACACACGCGAGACCTTCACGAAAAGCCTCTACGAGTCACTTCACAGTTGTGGGGTTCGTGCTTTCATGGACGACGAGGGTTTGGAGCGTGGTGATGAGATAGCGCCGAGCCTTCTGGAAGCCATTGATGACTCAGCAGCTTCCATTGTTATCATCTCTCCCGATTACGCTTCCTCTCATTGGTGTCTCGAGGAGCTCGCCAAGATTTGCCACTGTGGGAGGCTCATCCTGCCCGTTTTCTACCGGGTCGACCCGTCTCATGTTCGCAAACAAATGGGTCCCTTTGAAACCGGTTTCAAGTCCCATGAACAGAGGTTTGAGGAGCAAAAGGTTTTGGGGTGGAGGGAAGCTTTGAAGAAAGTTGGTGGAATTGCTGGTTTGGTTTTCAAGGGCAGTGACAGTGAGGTAGAGAATCTGATTCGCCTTTTGGTGCAAAGGGTCTTGAAGGAGTTGAGTAATACACCAATGAATGTGGCTGAGTTTGTAGTGGGGATTGATGATCGTGTTAAGAAGGTGATGGAGCTGTTACAAGTTGAATCCAATGGTGTCAGGGTTTTGGGGTTGTATGGGATGGGTGGGGTTGGTAAGACGACACTGGCCAAGGCTCTTTTCAATGACCTTGTTGGTCGTTTTGAGCGTCGTTGCTTCATTTCAAATGTGAGACACGATTCATCAAAAGAGGATGGTTTGGTTTCTCTTCAAAGCAAAATCATTAAAGATCTTTCCCTTAAAGAAGGGTCTCAGAGTGTTGGTATTTCTGCTATTAAACGAATAGCTAGTGAAAATCGAGTTCTGCTAGTGTTGGATGATGTTGATGATGTAAAACAACTTGATGCTTTGATTGGTAAGAGGGAATGGTTTTATGATGGAAGCCGTATAATAATAACCACAAGGGATACACTTGTTTTGCCTGAGAGTCATGTCACTGAGTTGTATGAAGTTAAGGAATTGTATCCTTCTGAAGCTCTAGAGTTATTCAGCCACCATGCACTGAGGAAAAAGGAACCTCCTAAAAATCTTCTGAATCTGTCAAAGCAAATTGTGTCTCTAACAGGAAGAATGCCTTTGGCTCTTGAAGTGTTTGGTTCCTTCTTGTTTGGTAAGAGAAGGGTGGAAGATTGGGAGGATGCTCTGGATAAGCTGAGAAGAATTCGCCCTGACCGTCTTCAAGATGTTTTGAAGATAAGTTATGATGGGTTAGATGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTCTTTGTTCAAATGGGAACTAAACGTGATGATGTGATTGATATATTCAAAGGTTGTGGTTTAAGGGGAGAGATAGCTATCACAGTCCTTGTAGAAAAATGCTTGATCAAAATAACTGAGGACAATACCCTGTGGATGCATGATCAAATTAGAGACATGGGAAGACAAATTGTTCTAGATGAAAACCTTTTCGATCCGGGTATGCGTAGTAGATTGTGGGATCTTGCTGAAATCATGGCTGTATTGAAGGATGAGAAGGGAACAAGATGTATTCAAGGAATTGTTCTAGACTTTGAGGAACAATTCAAACCCAATAAGAACCATGTTCGATCTCAAGCAGAGAAAAACAAGGAGGTTATACTTCATACGAAATCGTTTGAACCAATGGTTAACCTTAGACTGCTTCAGATCAATAATATGAGATTAGAAGGCGAGTATCTTCCAGCTGAACTGAAGTGGCTACAATGGCGAGATTGTCCTTTAGAATGCATGCCTTTGGACTCTTGGCCCCGAGAGCTGACTGTTCTTGATCTCAAAAAAAGCCAGAAAATGAAAAAATTGTGGGGATGGGAAAGTTATAAGGTACCAGAGAACCTAATGATCATGAACCTCTCCCACTGCATCCAACTTACTGCTATCCCTGATTTATCAAGCTGTCACCATCTAGAGAAGATTGATATGGAGAATTGCATTAATCTAACTAGCATTCATGAATCAATTGGCAGTTTGACTACTTTACGTAGCTTGAATTTGACACGTTGTTCAAACCTCATTGCCCTTCCTATTGCCAAAAAAGATATGCAGCTTGAAATCTCTGAAAACACTTTTTGCTGA 2139 0.4273 MSGTPAGAFRLRWDVFLSFRGEDTRETFTKSLYESLHSCGVRAFMDDEGLERGDEIAPSLLEAIDDSAASIVIISPDYASSHWCLEELAKICHCGRLILPVFYRVDPSHVRKQMGPFETGFKSHEQRFEEQKVLGWREALKKVGGIAGLVFKGSDSEVENLIRLLVQRVLKELSNTPMNVAEFVVGIDDRVKKVMELLQVESNGVRVLGLYGMGGVGKTTLAKALFNDLVGRFERRCFISNVRHDSSKEDGLVSLQSKIIKDLSLKEGSQSVGISAIKRIASENRVLLVLDDVDDVKQLDALIGKREWFYDGSRIIITTRDTLVLPESHVTELYEVKELYPSEALELFSHHALRKKEPPKNLLNLSKQIVSLTGRMPLALEVFGSFLFGKRRVEDWEDALDKLRRIRPDRLQDVLKISYDGLDEQEKCIFLDIACFFVQMGTKRDDVIDIFKGCGLRGEIAITVLVEKCLIKITEDNTLWMHDQIRDMGRQIVLDENLFDPGMRSRLWDLAEIMAVLKDEKGTRCIQGIVLDFEEQFKPNKNHVRSQAEKNKEVILHTKSFEPMVNLRLLQINNMRLEGEYLPAELKWLQWRDCPLECMPLDSWPRELTVLDLKKSQKMKKLWGWESYKVPENLMIMNLSHCIQLTAIPDLSSCHHLEKIDMENCINLTSIHESIGSLTTLRSLNLTRCSNLIALPIAKKDMQLEISENTFC* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02681 712 SMART till_3 12 146 IPR000157 GO:0007165
Rops2g02681 712 Pfam NB-ARC domain 189 407 IPR002182 GO:0043531
Rops2g02681 712 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 148 IPR035897 -
Rops2g02681 712 PRINTS Disease resistance protein signature 676 692 - -
Rops2g02681 712 PRINTS Disease resistance protein signature 373 387 - -
Rops2g02681 712 PRINTS Disease resistance protein signature 207 222 - -
Rops2g02681 712 PRINTS Disease resistance protein signature 280 294 - -
Rops2g02681 712 Gene3D - 10 170 IPR035897 -
Rops2g02681 712 Pfam TIR domain 13 178 IPR000157 GO:0007165
Rops2g02681 712 Gene3D - 171 332 IPR027417 -
Rops2g02681 712 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 175 - -
Rops2g02681 712 SUPERFAMILY L domain-like 480 696 - -
Rops2g02681 712 ProSiteProfiles TIR domain profile. 11 170 IPR000157 GO:0007165
Rops2g02681 712 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 704 IPR044974 GO:0006952
Rops2g02681 712 Gene3D - 339 423 IPR042197 -
Rops2g02681 712 Gene3D Ribonuclease Inhibitor 533 711 IPR032675 -
Rops2g02681 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 433 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02681 Rops-Chr2 44934952 44940262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02681 185 696 WRKY Transcription Factor Family AT5G45050 33.966 6.78e-73 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02681 - - lang:109340539 1025.39