Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02678 ATGGTTCCTGCTCCTCGTGGTTCTCGGATTGTTGCTGCTAGGGTTCCTAAGAAGGTTTTGCAATTTGCAGGGATTGAGGATGTTTTCACTTCCTCCAGGGGATCTACCAAGACTCTTGGAAATTTTGTCAAGGTAGAAGTGAAGATCCTTAGCCTTGCAATCAATGCCGTTGGTAGACCTGTTATTGTTCTTCCAACACCAGAGGGAGGAAATCCAAAAGTTGACAGCACTAAGGAAATGATTGGAATCTTCAGCCCCCAAATAGAGCTTTACATATATGAAATGCTTGAAGAGACAACACCATATGAGATGTTTGCTAGAGGGACATATTCAACTAGAAGTAAGGTACCAGCCCACACCTACCATGATATGTGTCCCATGCAACACCATCTTGCAACCTTGGCTAGTTTGCTCAAGCTCCCTTATGAGAAAGCTCAACCCCTACTACCTACTTCCTCCACAATGGGCACAACCCCTCAACATGCAACCAAAGTGGCTTGCTTCAAAACTGGACCAAGAGCAAACTCCTACGTGGAACAACATTCTTGCATGGGTGGTGGTGGGGGTTGA 570 0.4561 MVPAPRGSRIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKVEVKILSLAINAVGRPVIVLPTPEGGNPKVDSTKEMIGIFSPQIELYIYEMLEETTPYEMFARGTYSTRSKVPAHTYHDMCPMQHHLATLASLLKLPYEKAQPLLPTSSTMGTTPQHATKVACFKTGPRANSYVEQHSCMGGGGG* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02678 189 PANTHER RHO GDP-DISSOCIATION INHIBITOR 73 125 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Rops2g02678 189 SUPERFAMILY Ribosomal protein S5 domain 2-like 1 50 IPR020568 -
Rops2g02678 189 Gene3D Coagulation Factor XIII, subunit A, domain 1 68 133 IPR024792 -
Rops2g02678 189 Pfam RHO protein GDP dissociation inhibitor 73 116 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Rops2g02678 189 Gene3D - 1 58 IPR014721 -
Rops2g02678 189 SUPERFAMILY E set domains 49 122 IPR014756 -
Rops2g02678 189 Pfam Ribosomal protein S5, C-terminal domain 1 44 IPR005324 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02678 Rops-Chr2 44807562 44815343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02678 1 50 Cytoplasmic Ribosomal Protein Gene Family AT1G58983 86.000 2.27e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02678 K02981 - ini:109171967 85.8853