Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02671 ATGCGGCCTGCGGATACTACGAAACCACCCTACGTGGCGCGTGTGGAGAAGATCGAGCAAGATAACAGGAACAACGTGAAGGTACGAGTGAGGTGGTATTATAGGCCTGAAGAGTCGATTGGGGGAAGGAGACAGTTCCATGGTGCTAAGGACCTTTTTCTCTCTGACCTTCATGATGTTCAGAGTGCTCACACCATTGAAGAAAAGTGTGTTGTTCACTCTTTTAAGAACTATACTAAGCTTGAGAATGTAGGTGCTGAGGATTACTATTGTAGGTTTGAGTACAAGGCTGCTACTGGGGCTTTCACTCCTGACCGTGTTGCTGTGTATTGCAAATGTGAGATGCCCTATAACCCGGACGACCTACACGACTCACCCTCATGCAACTTATGTCGGTAA 399 0.4737 MRPADTTKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKDLFLSDLHDVQSAHTIEEKCVVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLHDSPSCNLCR* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02671 132 ProSiteProfiles BAH domain profile. 1 106 IPR001025 GO:0003682
Rops2g02671 132 Pfam BAH domain 2 105 IPR001025 GO:0003682
Rops2g02671 132 Gene3D - 1 128 IPR043151 -
Rops2g02671 132 PANTHER OS08G0421900 PROTEIN 1 123 - -
Rops2g02671 132 SMART BAH_4 1 106 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02671 Rops-Chr2 44527337 44527735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02671 11 108 Core DNA Replication Machinery Family AT4G14700 32.000 5.91e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02671 K25868 - gmx:100800993 250.366