Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02654 ATGGGTGCAGGTGACTACTACAAGATCCTCAAGGTGAACCGTAATGCCACAGATGAGGAACTGAAGAGGGCATATAAGAGGTTAGCCATGAAATGGCACCCAGATAAGAACCATCAACAACACCAAGTTAAGAAAGAAGAAGCTGAGGCCAAATTCAAGCAGATTTCAGAGGCTTATGATGTCCTCAGTGACCCCAAGAAGCGTCAGATCTATGATTTCTATGGCCATTATCCCCTTAACTCTATGAAGGTTAACAAGGAAAGTGATAATGGGGATGTTAGGATTCACAAGGGTGAGAAAGTTGGGGTTGTTGAGACCAAATTGGTGTGTACCCTTGAGGAACTTTACAAAGGTTGCAGAAGGAAGATGAAGATCTCAAGGACTGTTCCTGATGAATTTGGCAAATTGAAGTCTGTAGAAGAAACCTTGAAGATAGATATTAAACCTGGTTGGAAGAAAGGCACAAAAATAACTTTTCCTGGGAAAGGAAATCAAGAAGCAGGAACTACTCCTGCTGATCTAATCTTCGTGGTGGATGAGAAACCGCATGCTTTTTTCAAGAGGGATGGAAATGATTTGGTGGTCACCCAGAAAATCTTACTTCTGGAGGCACTCTTAGGAAAGACTCTCAACTTTTCAACCTTGGATGGAAGAGACCTCACAATTCAAGTGACAGATATTGTGAAACCAGGTTATGTGTTGGTGGTCCCAGATGAAGGAATGCCCATTTCTAAGGAACCTGGCAAGAGAGGAAAATTAAGAATCAAGTTTGATCTTATGTTCCCTTCAAGGCTTACCACGCAACAGAAGCATGAGTTGAAAAGGATTCTGAGTAATACTGATAAATCTTTTTAG 855 0.4152 MGAGDYYKILKVNRNATDEELKRAYKRLAMKWHPDKNHQQHQVKKEEAEAKFKQISEAYDVLSDPKKRQIYDFYGHYPLNSMKVNKESDNGDVRIHKGEKVGVVETKLVCTLEELYKGCRRKMKISRTVPDEFGKLKSVEETLKIDIKPGWKKGTKITFPGKGNQEAGTTPADLIFVVDEKPHAFFKRDGNDLVVTQKILLLEALLGKTLNFSTLDGRDLTIQVTDIVKPGYVLVVPDEGMPISKEPGKRGKLRIKFDLMFPSRLTTQQKHELKRILSNTDKSF* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02654 284 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Rops2g02654 284 SUPERFAMILY Chaperone J-domain 4 82 IPR036869 -
Rops2g02654 284 FunFam DnaJ-like subfamily B member 13 2 97 - -
Rops2g02654 284 Gene3D - 183 263 - -
Rops2g02654 284 PRINTS DnaJ domain signature 67 86 IPR001623 -
Rops2g02654 284 PRINTS DnaJ domain signature 7 25 IPR001623 -
Rops2g02654 284 PRINTS DnaJ domain signature 25 40 IPR001623 -
Rops2g02654 284 PRINTS DnaJ domain signature 47 67 IPR001623 -
Rops2g02654 284 Gene3D DnaJ domain 3 106 IPR036869 -
Rops2g02654 284 SUPERFAMILY HSP40/DnaJ peptide-binding domain 185 272 IPR008971 GO:0006457|GO:0051082
Rops2g02654 284 Pfam DnaJ domain 5 72 IPR001623 -
Rops2g02654 284 ProSiteProfiles dnaJ domain profile. 5 75 IPR001623 -
Rops2g02654 284 FunFam Dnaj homolog subfamily b member 82 181 - -
Rops2g02654 284 CDD DnaJ 5 64 IPR001623 -
Rops2g02654 284 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 277 - -
Rops2g02654 284 SUPERFAMILY HSP40/DnaJ peptide-binding domain 105 183 IPR008971 GO:0006457|GO:0051082
Rops2g02654 284 SMART dnaj_3 4 67 IPR001623 -
Rops2g02654 284 Gene3D - 107 181 - -
Rops2g02654 284 Pfam DnaJ C terminal domain 104 262 IPR002939 -
Rops2g02654 284 FunFam DNAJ heat shock family protein 182 277 - -
Rops2g02654 284 CDD DnaJ_C 104 265 - -
Rops2g02654 284 Coils Coil 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02654 Rops-Chr2 44206695 44209043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02654 6 74 C2H2 Transcription Factor Family AT1G74250 37.681 3.64e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02654 K09510 - gmx:100786068 485.723