Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02639 ATGGGGTTGGGTGCTGAGAATGGTAAGGTAGTGGAGTCTTTGGATGTGTGTAAATCAAAGGGGAGGAAGAAGAAGAATAAAGAGGATGGGATAGTGGAAGAAGAAGAGACTGGGTGTTGGTTTAGGTTGAGGTTCATAGGAAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCAGTTAGCGGCACCAGCACTAATTATGCTGAAAGTAAATCAACTAATGATACAAGTAGAGACCAACCAACAGTTCCAGCAGTCTCTTCAACAACCACTAGTAATGCTGAAAGCAATTCCTCCACTTCCAAACTTGAAGAAGAGCTTAAAGTTGCTTCCAGGCTGCGAAAATTCACTTTCAATGATCTTAAGTTGGCAACAAGAAATTTTCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGATGTGTGTTCAAGGGATGGATAGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACTGTTGCTGTGAAAACCCTCAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTATCTTGGTGATCTAGTTCATCCAAACCTTGTTAAACTTATAGGTTACTGCATTGAAGATGATCAAAGGTTGCTGGTGTATGAATTTATGCCTCGGGGAAGCCTGGAAAACCACTTGTTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCACTAGGAGCTGCAAAGGGTCTTGCTTTTCTTCATGAGGAAGCTGAAAGACCAGTGATATATAGGGATTTCAAAACTTCCAATATACTATTGGATGCAGATTACAATGCCAAGCTCTCTGACTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACCCATGTGTCTACTCGGGTGATGGGAACTTATGGTTATGCAGCACCAGAATATGTCATGACGGGACATCTTACATCAAGAAGTGATGTGTATAGTTTCGGAGTGGTACTACTTGAGATGTTGACCGGCAGAAGATCCATGGACAAAAACCGACCCAATGGTGAACATAACCTTGTGGAATGGGCTAGACCACATCTAGGAGAGAGAAGAAGGTTCTACAGGTTGATAGACCCGCGCTTGGAAGGACACTTTTCCATAAAAGGAGCTCAGAAAGCTGCTCATCTTGCTGCTCATTGCCTTAGCAGAGATCCAAAAGCCAGGCCCCTGATGAGTGAAGTTGTAGAAGCCTTAAAGCCTCTGCCAAATCTCAAGGACATGGCTAGTTCATCATATTATTTCCAAACAATGCAAGCTGACCGTTTCAGTGCAAGTCCAAATACTAGAAATGGGAGAACACAAGGAGCATTGCTCACAAGGAATGGACAGCAACAGAGGAGCCTTTCAATACCACATGGTACTCATGCTTCTCCATATCACCATCAGTATCCCCAACAATCACCAAAACCCAATGGCAAGGCACAAAGTTGA 1461 0.4387 MGLGAENGKVVESLDVCKSKGRKKKNKEDGIVEEEETGCWFRLRFIGSCISSRSKVDSSVSGTSTNYAESKSTNDTSRDQPTVPAVSSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNYLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAHLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTQGALLTRNGQQQRSLSIPHGTHASPYHHQYPQQSPKPNGKAQS* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02639 486 Gene3D Phosphorylase Kinase; domain 1 87 213 - -
Rops2g02639 486 Pfam Protein tyrosine and serine/threonine kinase 132 408 IPR001245 GO:0004672|GO:0006468
Rops2g02639 486 PANTHER OS01G0588500 PROTEIN-RELATED 91 411 - -
Rops2g02639 486 Gene3D Transferase(Phosphotransferase) domain 1 214 430 - -
Rops2g02639 486 MobiDBLite consensus disorder prediction 54 100 - -
Rops2g02639 486 MobiDBLite consensus disorder prediction 469 486 - -
Rops2g02639 486 MobiDBLite consensus disorder prediction 54 103 - -
Rops2g02639 486 FunFam Serine/threonine-protein kinase BIK1 95 213 - -
Rops2g02639 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Rops2g02639 486 ProSiteProfiles Protein kinase domain profile. 128 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02639 486 MobiDBLite consensus disorder prediction 433 486 - -
Rops2g02639 486 CDD STKc_IRAK 134 411 - -
Rops2g02639 486 ProSitePatterns Protein kinases ATP-binding region signature. 134 166 IPR017441 GO:0005524
Rops2g02639 486 MobiDBLite consensus disorder prediction 433 462 - -
Rops2g02639 486 SUPERFAMILY Protein kinase-like (PK-like) 114 431 IPR011009 -
Rops2g02639 486 FunFam Probable serine/threonine-protein kinase PBL8 214 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02639 Rops-Chr2 43748155 43751816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02639 75 408 Glycoside Hydrolase AT3G07070 53.550 6.22e-117 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops2g02639 PK_Tyr_Ser-Thr 9.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02639 - - gmx:100807510 914.064