Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02623 ATGACAAAAACCAGTGACCAGGTGAAAGAGTGGGTCACACAAATGAGAGAAGTTTCTTATCGCATCGAAGATGCCATCGATGAATACTTGCTCCAAGTAGGGGCGACCCAGTTTTGGCTTCAAGTGGACAATAAGTTTCATTGCCAGTCTGGGGTTATTGGTGTTGTATGTAAAATTTGTGACTTGCTCAGAACTGTACTGCCCCGCCATAAGATTTCATCACAGATTGGTGAGATTGAAAAATCATTAGGCAGACTCACCAAAGCAAAGGATACTTTCGGGTTCAATCCATCTATTCCAGAATCAAGCAATGATGGTGGTGCAACTGCTCATACTTCCACACTGCACCACCTTCGAAGGGGAGCCCTTTTCATTGAGGATGATCAACTTGTGGGGGTAGATCACACCAAGCAAGTACTATCCAGTTGGTTGAGAGAAGAACATAGTACTCGCACTGTGATGTCGGTGGTAGGTGAAGGTGGACTCGGTAAAACTACTATTGTGAACAAGGTATTCAATGAGCAAAAGAAGGGAAAATCTTTTGATTGCTATGCTTGGATCACTTTGTCTCTATTGCTCAGGGGGGAACGTCTCTTAAAGAAATTGATAGAGGAGTTTTATGACGGGCCTGACAAAAAAAATGTAGTCAAGGAAATTTGTGAAATGGACATTAACTCTCTGATAAGAAAACTAAGAGGATACTTACAAGGAAGGAGCTATATGATTGTTTTTGATGATGTATGGGAGATAAGCTTTTGGGGAAATGTAGAACTTGCATTACCAAAAGGCAAGGGGAGGATAATAATCACTACAAGAGATAGGAGAGTTGCTGAGTTTTGTTACAGTTATGGACAAATTCACATCCTCGACATGGAACCATTGAATCGAGATGATGCTTGGAACCTTTTCTGTCTTAAGGCATTTCCAAAAGGTTGCCCCAAAGATTTGGAAGGATTGTCTAAGGAGTTTGTTAAGAAGTGCAATGGAGTGCCACTTGCAATTGTGGCTATGGCTGGCCTCCTATCAACCAAGAATAAAAATGTCTCAGAATGGCGAAAGGTATATGATAGCCTACGCTCTAAACTTTCAAGTGATCCTCATCTTAGTAGTATCCACCAGGTTTTATCTGAAAGTTACCAAGATCTTGATTATCACCTCAAGTCATGCCTCTTGTACTTCGGCCTTTTCCCAGAGGATTCCTCGATTAGTTGTGTGAGACTCATTAATTTGTGGATAGCAGAGGGTTTTGTAGAGAACAAAGAGAATGAAGGTCAAACACTAGAAGAAGTAGCAGAGGACTACTTATTTGAGCTTATTGCTAGGAGCTTTGTTAAAGTAGCTGAAGTGTATCCCTATGGCAGAGTTAAAAGGTGTCGGGTCCATGATTTGATGCATGACTTTATTCTCAGAAAGTGTGTGGAACTAAACTTTTGTCAAGTGAAAAGTGAGGGATGTAAGTCGCATGAGTGGACTCGGCGCTTATCAATTGACACAAGAGTTGATGTTACTATGAAAAGAAGCGCTCCAAATTATGGACAAGTGCGGTCTTGTTTTCTTTTTAACATTATCCAAGACACACCCACTCCTGTTGATGAATCCTTGTTTTCTGGTTTCAAGCTCTTGGTAAGATTAGATTGTGAAGGTACACCTCTTGATTATCTTCCTGAAGCAGTTGGAAACTTGTTACATTTGAAATATTTGAATTTAAGGAATACTAATATCAAGACCATTCCTAAGTTCATTGGCAAGTTGCAGAACCTAGAGACTCTGAACCTAAAATATACTAATGTGTGTGAATTGCCGTTAGAGATTAACAAACTTATCAAATTACGTTGTCTCCTGGTATATTCAACTGATATCTATGGCGTGAAATTAAAGGAAGGGGTTGGGAATTTAAGTGCTTTGCAGAAGTTACGCATGGTTGACGCAAGTGTTGTTGGGGGTGGTATTCTAAGTGAACTAAAGAATCTGAAGCAGATGAGGGCTTTGGGCGTTAGCAAGCTAAACAGAGAAAATGGAGAATTATTATGCAGTGCTGTAAAGAGCATGACCAATCTGTTAACATTGGAAGTTGCATCAAATCAAGTTCTTGACTTGGAATCACTAACTGATCCTCCTTGGCACCTCCAGCGCCTTCACCTTAGAGGATGTTTGCGAAAATTGCCTAACTGGATTCCCAGACTTGAAAATCTAGTCAGGTTGCGCTTGATTTTTTCAAGATTAAGGGAAGATCCACTGCCTCTTCTTAAAGACATGTCATTGTTGGAGCTGGAACTTTTGGAGTCATATGAAGGTAATGAGCTGTATTTCCAAGAGGGATGGTTTATGAATCTGAAGGTATTGAATATCTACTTGCCCAGGTTGGACATTTTAAAAATAGATGAAGGAGTAATGCCTCACCTCCATCTGTTCGATTTATATCCACGCCCTCAAACGGTGGAAGTGCCGGTTCATGTTCAGAAAGCGATGTTATAG 2475 0.4053 MTKTSDQVKEWVTQMREVSYRIEDAIDEYLLQVGATQFWLQVDNKFHCQSGVIGVVCKICDLLRTVLPRHKISSQIGEIEKSLGRLTKAKDTFGFNPSIPESSNDGGATAHTSTLHHLRRGALFIEDDQLVGVDHTKQVLSSWLREEHSTRTVMSVVGEGGLGKTTIVNKVFNEQKKGKSFDCYAWITLSLLLRGERLLKKLIEEFYDGPDKKNVVKEICEMDINSLIRKLRGYLQGRSYMIVFDDVWEISFWGNVELALPKGKGRIIITTRDRRVAEFCYSYGQIHILDMEPLNRDDAWNLFCLKAFPKGCPKDLEGLSKEFVKKCNGVPLAIVAMAGLLSTKNKNVSEWRKVYDSLRSKLSSDPHLSSIHQVLSESYQDLDYHLKSCLLYFGLFPEDSSISCVRLINLWIAEGFVENKENEGQTLEEVAEDYLFELIARSFVKVAEVYPYGRVKRCRVHDLMHDFILRKCVELNFCQVKSEGCKSHEWTRRLSIDTRVDVTMKRSAPNYGQVRSCFLFNIIQDTPTPVDESLFSGFKLLVRLDCEGTPLDYLPEAVGNLLHLKYLNLRNTNIKTIPKFIGKLQNLETLNLKYTNVCELPLEINKLIKLRCLLVYSTDIYGVKLKEGVGNLSALQKLRMVDASVVGGGILSELKNLKQMRALGVSKLNRENGELLCSAVKSMTNLLTLEVASNQVLDLESLTDPPWHLQRLHLRGCLRKLPNWIPRLENLVRLRLIFSRLREDPLPLLKDMSLLELELLESYEGNELYFQEGWFMNLKVLNIYLPRLDILKIDEGVMPHLHLFDLYPRPQTVEVPVHVQKAML* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02623 824 Gene3D - 110 283 IPR027417 -
Rops2g02623 824 FunFam Probable disease resistance protein At1g63360 379 470 - -
Rops2g02623 824 SUPERFAMILY L domain-like 459 807 - -
Rops2g02623 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 393 IPR027417 -
Rops2g02623 824 Pfam Rx N-terminal domain 4 37 IPR041118 -
Rops2g02623 824 Gene3D Ribonuclease Inhibitor 512 818 IPR032675 -
Rops2g02623 824 Gene3D - 1 73 - -
Rops2g02623 824 PRINTS Disease resistance protein signature 327 341 - -
Rops2g02623 824 PRINTS Disease resistance protein signature 153 168 - -
Rops2g02623 824 PRINTS Disease resistance protein signature 582 598 - -
Rops2g02623 824 PRINTS Disease resistance protein signature 234 248 - -
Rops2g02623 824 Gene3D - 293 383 IPR042197 -
Rops2g02623 824 Pfam NB-ARC domain 138 380 IPR002182 GO:0043531
Rops2g02623 824 Gene3D - 385 471 IPR036388 -
Rops2g02623 824 PANTHER DISEASE RESISTANCE PROTEIN RP 10 788 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02623 Rops-Chr2 43477153 43482200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02623 544 741 WRKY Transcription Factor Family AT5G45050 31.797 7.05e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02623 K13457 - qsu:111987192 626.32