Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02620 ATGAGTGAGAAAAACATCACCATAGATGAATTTGCACTTCTCGAGTTCAAATCCTCCATTACTTTAGACCCTTATCATATTATAGGTAATTGGTCAACCTCCTCTTCTTCTTTATGCAATTGGGTTGGTGTCACTTGTGATGGGCACCATAAAAGAGTCAAGGGTTTGAATCTTAGTAACATGGGTCTTAGAGGTACCATTTCCCCACAACTTGGGAACCTTTCCTTCCTTGTTGAGCTTGACCTCCATGGCAATGGCTTCTATGGAGAATTGCCAAAAGAGTTATTTGGGTTGCACCAACTGAAGTTGCTTGACTTGAGCAGCAACGAGTTTGTTGGAGGAATCCCAACAAGGGTAGGGGACTTATCAAAACTAGAAGAATTGAATCTTGGCCATAATAATCTTGCTAGTTTTATCCCACAATCTATGTACAACTTGTCAAAGTTAGAGCTCCTAAATTGCTCCTTCAATTTCATCAAAGGAACTATTCCACCTGTGATTGGTCAACTTCGTCAGTTGAAGATTTTGGATATTAGAAATAACACGCTGTTTGGGGCCATACCACCAACAATTTCCAACCTATCTTCACTTGAAGAAATCCATTTATCTTATAACTCTCTATCAGGAGAAATTCCCAAAGAGATTGGTGGTCTTACACAATTAAGAAGATTGCACCTTCAATCAAATCAGCTTTTGGGCAATATACCATCAACAATATTCAACTCATCATTGCAATATGTTGATCTTGGTCATAATAATATGTCTGGCAGTCTTCCATCAAATATTTGTCAAGGACTTCCCGAACTTAAATTACTTTATCTTTATGAAAATGATCTTTCTGGTAAGATACCATCTATTTGGCATCAATGCAAAGAGTTGGAAGATTTAGAACTATCCTTCAATAATTTTGACAAAGGACTTCTGCCAGCTGACATTGGAAACTTGACCATGCTTCAATATTTGTATCTTGGCAGCAACAACTTGGAAGGTGAAATCCCAGTCTCCCTTTTAAATGTCTCTTCTTTGAGCGAGGTCTTCCTCAACAAAAACAATTTAAATGGAAGGGTCCCACAGAAGATGTGTCATCAGATTCCTCAACTTCAAATCTTTAGTATACGTGCTAATCAATTTGAAGGAAGCATTCCTAGATCAATTGGCAACTGCACAGTGCTTCAAGTGTTTGAGTTAGGGGACAACTCTTTGACAGGTTCAATACCAATGGAGATTGGTGATCTTCCTAAACTTGAGTTTGTAACACTGGGAAATAACAAGTTGAATGGATCTATTCCTTCAAAACTCTTCAACATTTCAACATTAGAAATCTTGTATCTTGCAAGGAATTCTCTCTCAGGCACCCTTCCATCAAATATAGGAAATGGCCTTCCTAATCTAAAAGAATTGTACATGCATGAAAACAAACTTGTTGGAGATATTCCAATTGGTATATCTAATGCTTCTAAGCTCACTACAATTGATTTGAGTGACAATCAATTTAGTGGAATTATACCCAAAGCATTTGGAGATTTAATAGACCTCGAATGGCTCGGTTTAGCTTTGAATAATTTGACAACAGATGATTCTCATGGATTCAACTTATTTACTTCGTTGACAAGGTGCAGACACTTGACATATCTGGATATATCAGCGAATAATTTACGATCAAAACTTCCCAAATCAATTGGAAATCTATCCATGTCTCTAGATGTCTTTTGGGCAGCTTCTTGTGGATTTAATGGCAATGTTCCACTAGAAATCGGAAACATAAGCAACTTGATATTTTTATCTTTGGGTGGGAATGATTTAACTGGACAAGTGCCCAGAACAATCAAAAGGTTACAGAAACTTCAGTATTTAGATCTTGGCTACTGTGGACTGCAGGGATCTGTCGTTGATGAGCTTTGTGAAATTAGGAGTTTAAGTGAGTTGAATCTAACAAATAATAAGTTTTTTGGAGAATTGCCAACATGCTTAGGAAATATGACTTCTCTTAGAAAGGTTTACATGGGGTCTAACAGATTGACTAGGATACCTTCTTCTTTTTGGAGTCTAAAAGATATCTTAGAAGTTAACTTATCCTCCAATGCTTTAACTGGAAATCTTCCACTTGAGATTGGACAGTTGAGAGCTATTATACTATTGGATATTTCAAGAAATGAGATTTCAAGCAACATTCCTACAACCATCAGTTTCTTGAAAACTTTGCAGACTCTCTCCTTAATGCATAACAAATTACAAGGGTCTATCCCTCCATCACTTGGTGAAATGGTAAGCTTGAGCTTATTGGACTTATCCCAAAATCTTTTGTCTGGTGGTATTCCAAAATCCTTGGAGTCACTTGTTTATCTTAAATACATAAACTTTTCATACAATAGATTACAAGGAGAGATTCCTGACGGTGGACCTTTCAAAAATTTCACTGCTCAATCTTTCATGCATAATGAAGCACTTTGTGGCAATCCTCGCCTACAAGTACCTCCATGTGATAAACAAGTTAGGCCAAGGTCAATGGCAAAGAAGATTTTAATCAAATGCATACTGCCCATAATTGTGTCAATCATTTTGATCGTTACATGCATAATACTTCTACGTTGTAAAAGGAAAAAGGTTGAAAATCCACTTGAAAGGGATTTATCAACTTTAGGAGTTCCAAGAAGGATTTCCTATTATGAAATTGTACAAGCAACTAATGGATTCAGCGAGAATAATATACTTGGAAGGGGGAGCTTTGGTTCTGTCTATCAAGGGATGCTTTCAAGTGGGATGATGGTTGCAATTAAAGTAATTGATTTGGACTTGGAAGTAACATCTAAGAGCTTTGATGCAGAATGCAATGCAATGCGCAATCTACGACATCGAAATCTTGTCAAGATTATCAATAGTTGTTCAAATGATGATTTTAAATCTTTGGTGATGGAGTTCATGTCAAATGGAAGCGTGGACAAATGGTTATATTCAGACACCTATTGTCTAGATTTCTTGCAAAGGTTGAACATAATGATAGATGTGGCTTCTGCATTGGAATATCTCCATCATGGTTCTTCAATACTAGTGGTTCATTGCGATCTGAAGCCTAGTAATGTTTTATTGGATGAAAACATGGTTGCACATGTTAGCGATTTTGGCATGGCCAAGCTCTTGGACAAAGGACAATCTAAAACTCATACCGAGACCTTGGGTACTCTTGGCTACATTGCACCAGAGTATGGATCTAAGGGAATTGTTTCTGTTAAAGGAGATGTGTACAGTTATGGAATTATGTTAATGGAAATGTTCACAAGAAAGAAGCCAATTGATGATATGTTTGCAGCAGAGTTAAGCTTGAAAAATTGGATCAATGAATCAATGCCCAATTCAATCATGGATATTGTGGATTTCAATTTAGTACAACAATATAGGGAACAAATTGATGACATATTGGTTCATATATCATCTATTTTGGAATTAGCCTTGAATTGTTGTGCAGATTCATCTGAAGCACGAATTAATATGACCGATGTCACCACGTCATTAACAAAAATCAAGACGTTGTTAATCCAATGA 3540 0.3669 MSEKNITIDEFALLEFKSSITLDPYHIIGNWSTSSSSLCNWVGVTCDGHHKRVKGLNLSNMGLRGTISPQLGNLSFLVELDLHGNGFYGELPKELFGLHQLKLLDLSSNEFVGGIPTRVGDLSKLEELNLGHNNLASFIPQSMYNLSKLELLNCSFNFIKGTIPPVIGQLRQLKILDIRNNTLFGAIPPTISNLSSLEEIHLSYNSLSGEIPKEIGGLTQLRRLHLQSNQLLGNIPSTIFNSSLQYVDLGHNNMSGSLPSNICQGLPELKLLYLYENDLSGKIPSIWHQCKELEDLELSFNNFDKGLLPADIGNLTMLQYLYLGSNNLEGEIPVSLLNVSSLSEVFLNKNNLNGRVPQKMCHQIPQLQIFSIRANQFEGSIPRSIGNCTVLQVFELGDNSLTGSIPMEIGDLPKLEFVTLGNNKLNGSIPSKLFNISTLEILYLARNSLSGTLPSNIGNGLPNLKELYMHENKLVGDIPIGISNASKLTTIDLSDNQFSGIIPKAFGDLIDLEWLGLALNNLTTDDSHGFNLFTSLTRCRHLTYLDISANNLRSKLPKSIGNLSMSLDVFWAASCGFNGNVPLEIGNISNLIFLSLGGNDLTGQVPRTIKRLQKLQYLDLGYCGLQGSVVDELCEIRSLSELNLTNNKFFGELPTCLGNMTSLRKVYMGSNRLTRIPSSFWSLKDILEVNLSSNALTGNLPLEIGQLRAIILLDISRNEISSNIPTTISFLKTLQTLSLMHNKLQGSIPPSLGEMVSLSLLDLSQNLLSGGIPKSLESLVYLKYINFSYNRLQGEIPDGGPFKNFTAQSFMHNEALCGNPRLQVPPCDKQVRPRSMAKKILIKCILPIIVSIILIVTCIILLRCKRKKVENPLERDLSTLGVPRRISYYEIVQATNGFSENNILGRGSFGSVYQGMLSSGMMVAIKVIDLDLEVTSKSFDAECNAMRNLRHRNLVKIINSCSNDDFKSLVMEFMSNGSVDKWLYSDTYCLDFLQRLNIMIDVASALEYLHHGSSILVVHCDLKPSNVLLDENMVAHVSDFGMAKLLDKGQSKTHTETLGTLGYIAPEYGSKGIVSVKGDVYSYGIMLMEMFTRKKPIDDMFAAELSLKNWINESMPNSIMDIVDFNLVQQYREQIDDILVHISSILELALNCCADSSEARINMTDVTTSLTKIKTLLIQ* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02620 1179 Pfam Protein kinase domain 899 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02620 1179 SUPERFAMILY Protein kinase-like (PK-like) 878 1170 IPR011009 -
Rops2g02620 1179 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 364 531 - -
Rops2g02620 1179 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 974 1179 - -
Rops2g02620 1179 SMART LRR_typ_2 660 683 IPR003591 -
Rops2g02620 1179 SMART LRR_typ_2 170 193 IPR003591 -
Rops2g02620 1179 SMART LRR_typ_2 74 98 IPR003591 -
Rops2g02620 1179 SMART LRR_typ_2 315 339 IPR003591 -
Rops2g02620 1179 SMART LRR_typ_2 412 436 IPR003591 -
Rops2g02620 1179 SMART LRR_typ_2 218 242 IPR003591 -
Rops2g02620 1179 SMART LRR_typ_2 266 289 IPR003591 -
Rops2g02620 1179 SMART LRR_typ_2 461 485 IPR003591 -
Rops2g02620 1179 SMART LRR_typ_2 194 217 IPR003591 -
Rops2g02620 1179 SMART LRR_typ_2 731 755 IPR003591 -
Rops2g02620 1179 SMART LRR_typ_2 122 146 IPR003591 -
Rops2g02620 1179 SMART LRR_typ_2 486 508 IPR003591 -
Rops2g02620 1179 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 535 831 - -
Rops2g02620 1179 Gene3D Transferase(Phosphotransferase) domain 1 974 1177 - -
Rops2g02620 1179 Gene3D Ribonuclease Inhibitor 461 527 IPR032675 -
Rops2g02620 1179 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1017 1029 IPR008271 GO:0004672|GO:0006468
Rops2g02620 1179 ProSitePatterns Protein kinases ATP-binding region signature. 904 926 IPR017441 GO:0005524
Rops2g02620 1179 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 6 161 - -
Rops2g02620 1179 Gene3D Ribonuclease Inhibitor 163 262 IPR032675 -
Rops2g02620 1179 Gene3D Ribonuclease Inhibitor 7 162 IPR032675 -
Rops2g02620 1179 Gene3D Ribonuclease Inhibitor 362 460 IPR032675 -
Rops2g02620 1179 Gene3D Ribonuclease Inhibitor 263 361 IPR032675 -
Rops2g02620 1179 SMART serkin_6 898 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02620 1179 SUPERFAMILY L domain-like 16 356 - -
Rops2g02620 1179 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 162 363 - -
Rops2g02620 1179 Pfam Leucine rich repeat 487 537 IPR001611 GO:0005515
Rops2g02620 1179 Pfam Leucine rich repeat 243 303 IPR001611 GO:0005515
Rops2g02620 1179 Pfam Leucine rich repeat 171 231 IPR001611 GO:0005515
Rops2g02620 1179 SUPERFAMILY L domain-like 289 556 - -
Rops2g02620 1179 Pfam Leucine Rich Repeat 124 143 IPR001611 GO:0005515
Rops2g02620 1179 ProSiteProfiles Protein kinase domain profile. 898 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02620 1179 SUPERFAMILY L domain-like 572 820 - -
Rops2g02620 1179 FunFam Serine-threonine protein kinase plant-type 879 973 - -
Rops2g02620 1179 Gene3D Phosphorylase Kinase; domain 1 881 973 - -
Rops2g02620 1179 Pfam Leucine rich repeat N-terminal domain 9 47 IPR013210 -
Rops2g02620 1179 Gene3D Ribonuclease Inhibitor 528 832 IPR032675 -
Rops2g02620 1179 SMART LRR_sd22_2 539 565 - -
Rops2g02620 1179 SMART LRR_sd22_2 315 341 - -
Rops2g02620 1179 SMART LRR_sd22_2 755 781 - -
Rops2g02620 1179 SMART LRR_sd22_2 170 196 - -
Rops2g02620 1179 SMART LRR_sd22_2 485 506 - -
Rops2g02620 1179 SMART LRR_sd22_2 122 148 - -
Rops2g02620 1179 SMART LRR_sd22_2 98 117 - -
Rops2g02620 1179 SMART LRR_sd22_2 218 237 - -
Rops2g02620 1179 Pfam Leucine Rich repeat 539 553 IPR001611 GO:0005515
Rops2g02620 1179 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 534 1171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02620 Rops-Chr2 43374125 43388188 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02620 579 816 Receptor kinase-like Gene Family AT3G47570 30.417 2.13e-22 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops2g02620 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02620 - K13420 gmx:100784397 1300.42