Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02618 ATGGAAGATCATAACAACATCTTGGAGTCTGACAGGGGTGAAGAAATTGATGGCAATAAGGATCAAAAGCTTGAATCAGCTAAGGGGGGAATGGAAGAGGCTAGGGAAGAAAATGAGAGTTTGAAACTATCATTGGCAAGGGTTGTAAAAGATTATCAAACACTGCAAATGGACTTCTTTGACATTCTTTCACAAGAAGAGGCAACCAAAGCTAAAGGTACATCAGCTACTAGCCATGAAGAAAACAAGGAAAGTGAACTTGTTTCCCTTTCTCTTGGGATTTCATCCATAGGCCAGCCTATCATGGATGAGAAAAAGAATAGGAAGAGAACTGAAAAGACCAAAGAAGATGATGAGAATTTGGATGAAGGACTTGCACTTGGGTTAGATATCAGATTTGACCCTTCAACTCAAGCTCAAGCCACAAAAATTCCCAGCACTGAAAGTAGCTTTGATGAGGAAGGGAAGGAAGAGGAACTCACTAAAATATGGCCACCTAGTAAAGTTCTAAAGACCACAAGAACTGGGGATAAAAGTGAAGCTTCTCAATATACTGAGCTCAAGAAAACTAGGGTTTGTATCAGAGCCAGATGTGATACACAAACGATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATGGCAAAAGGAAATCCATGCCCCCGAGGATACTACCGATGCACTGTCTCTCCATCTTGTCCTGTGAGAAAACAGGTTCAAAGATGTGCTGAAGACATTTCAATCTTGATTACCACCTATGAAGGAACCCACAACCATCCACTGCCTACTTCAGCCACTGCCATGGCCTATACAACTTCTGCAGCTGCTTCCATGCTTCAGTCTCCCTCATTGAGCTCTCAACAAGGACCAGCCAATTCACATTCAGTCCCCCATATCAATTCCAGTATTGCTTATAATCTTAATGCCCTAAACTTCACATCAACCTGCCAACAGTTCTCAAGACCACAACAATTATATTTTCACAATTCACCATCCTATAATTCTCACCCCACCGTTACTCTTGATCTTACTGCACCTCCAACTTCATCTCATATAGGAAAATTCACCCCATCCTTCTCTTCCATACCAAAATATTCATCAACAGACCACAATTTTTCATCAACTGTCACTCCTTTGCAATCTAGTATGCTTCAGTCATCTTTGAGCCCTTATAGTGGGTTCTTCAACCATGGGGGACTGATCACCCAAAATAGAAACCAATATGGTTCCCTGATGAACACTGGAAACCAGCTCTTTCAGGGGCATCTCTACCAACCTAATTACATGAGCAACCATGCCATTTCTCAACAACCTTTACTGGATTCCATTGCAGCCACAACCAAGGCAATCACAGCAAACCCAAAATTTCAATCTACACTAGCAGCTGCTCTCACAACATACGTTGGCAATAGAGCTGCTGGTGATGGGGTAAGAGAAGATCATGTTGTGGCCGAGAGTGCAGCTTTGAACTTAAATCTAGGAGGAGATATGCCATACACAAAGAACCCAGTTCACACTTCTAGCCAAAATGGCATAGGATGTGCATCATCAAGTTACCTAAGTAATGTTCAAAATGAAAACATGACCATATTTCCACCACCACGAGCCTCTAAAAGTTCCTTTGGATTGGCTTCTAATAGAAGTAACCAACTCTTGGAGGAAAAGAAATGA 1677 0.418 MEDHNNILESDRGEEIDGNKDQKLESAKGGMEEAREENESLKLSLARVVKDYQTLQMDFFDILSQEEATKAKGTSATSHEENKESELVSLSLGISSIGQPIMDEKKNRKRTEKTKEDDENLDEGLALGLDIRFDPSTQAQATKIPSTESSFDEEGKEEELTKIWPPSKVLKTTRTGDKSEASQYTELKKTRVCIRARCDTQTMNDGCQWRKYGQKMAKGNPCPRGYYRCTVSPSCPVRKQVQRCAEDISILITTYEGTHNHPLPTSATAMAYTTSAAASMLQSPSLSSQQGPANSHSVPHINSSIAYNLNALNFTSTCQQFSRPQQLYFHNSPSYNSHPTVTLDLTAPPTSSHIGKFTPSFSSIPKYSSTDHNFSSTVTPLQSSMLQSSLSPYSGFFNHGGLITQNRNQYGSLMNTGNQLFQGHLYQPNYMSNHAISQQPLLDSIAATTKAITANPKFQSTLAAALTTYVGNRAAGDGVREDHVVAESAALNLNLGGDMPYTKNPVHTSSQNGIGCASSSYLSNVQNENMTIFPPPRASKSSFGLASNRSNQLLEEKK* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02618 558 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 14 478 IPR044810 GO:0003700
Rops2g02618 558 MobiDBLite consensus disorder prediction 532 551 - -
Rops2g02618 558 Coils Coil 24 51 - -
Rops2g02618 558 MobiDBLite consensus disorder prediction 69 120 - -
Rops2g02618 558 MobiDBLite consensus disorder prediction 532 558 - -
Rops2g02618 558 FunFam probable WRKY transcription factor 31 188 265 - -
Rops2g02618 558 MobiDBLite consensus disorder prediction 139 159 - -
Rops2g02618 558 ProSiteProfiles WRKY domain profile. 198 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g02618 558 MobiDBLite consensus disorder prediction 102 120 - -
Rops2g02618 558 Gene3D WRKY domain 188 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g02618 558 SMART WRKY_cls 203 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g02618 558 SUPERFAMILY WRKY DNA-binding domain 196 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g02618 558 MobiDBLite consensus disorder prediction 1 40 - -
Rops2g02618 558 Pfam WRKY DNA -binding domain 204 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02618 Rops-Chr2 43336772 43341523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02618 11 490 WRKY Transcription Factor Family AT1G18860 37.127 9.06e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops2g02618 WRKY 7.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02618 - - gmx:102666229 582.022