Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02615 ATGAAGAAATTATGGGTTACTTTCTGTTACTTGTTTCCTGCAATCATTCTTGTGCTGCTTATTCCCACTTCAATTGCACAGTTAACACCAAGTGAGACTAGAATTCTTTTCCAAGTTCAGAGACTTGTTGAATATCCTCAAGTTCTTCAAGGATGGACAAAGTGGACCAACTTCTGCTTCCTCCCTCCTTCACCTTCACTCAAGATAGTTTGCTCAAATGGTCATGTGACAGAATTAACTATCATTGGAAACAAGAGCTCCCCATCTTCACACAGCCTCAAAGGAGCTTCTTGGAATTCTGGTCAAGCTCTTTCAGGAAGCTTCTCCATTGATTCTCTCTTCACTGTTGTGACAAAGCTTTCAAATTTGAAGATGTTGTCATTGGTGAACTTGGGTTTGTGGGGTCCTTTACCTGCCAAGATCAACAGGTTTTGGTCTATGGAAGTGCTGAACATTAGCTCAAATTTCATTATTGGGGAAATCCCTTCATCATTATCCTCAATGAAAAATCTGAGGAGTCTGGTTTTGGCTGATAATCTCTTCAATGGAAGTGTTCCAGATCTCAAAAGTTTAACTTCTCTTGAAGAGCTGAACTTGGGTGGTAACAAACTGGGTCCTGAATTCCCTTCAGTAGGAAAAAATCTTGTGAGTATAAACTTGAGAAAGAATTCCATGAGATCTCAGATTCCTCCCCAGTTAGCTCACTTAGATAAACTTCAAATATTTGACATCTCTTCCAATAAATTTTTTGGAAACATCCCATCCAATATCTTCTCTCTGCCTTCCCTCAAGTACCTAAGCTTGTCTTCAAACCAACTAAGTGGTAACCTTTCAATGGAAATGACCTGTAGCTCTGCACTAACATTTGTGGACATCTCACACAACCTTCTGGTAGGAAAATTACCATCCTGCATTGTTTCAATGTCTTCAAAGGCCAAGGTACTATATTCTGGGAATTGTTTGTCAACCAAAAGGTTAAATGATCAACAACATCCATCTTCATATTGCAAGAAAGATGCTGCCTTAGCTGTTAAGCCTACTACTAGAAATCTGAAAAAGGAATCGGGTATGAAACTAGGCCTAGTACTTGGTGTTACGATTGGAGTTGTTATAGGAATTGCAGGACTTCTAGTTCTACTCATTGTGATCATCTTGAGAAAGTCCAAAGCAAAAACATCTTATCATAACAAAGACAGATCTATTGCTGATAAATTTTCTGCCCGTGCCTCTCCAAGACCAAATATTGATGCAAGACGTGTTCCTCAGACAATGAGGATAGCTGCTGTTGGACTGCCACCATACCTTAATTTCACATCAGAAGAAATTGAAGATGCAACAAACAACTTTGACCCATCAAATCTAATAGGAGAAGGATCACAAGGACAGCTATATAAAGGTTGGCTCAGAGATGGTTCAGTGGTCCTGGTTCATTGTGTAAAAATAAAGCAGAAGGGTTTGCCCCACAGCATAATGCAGGACTTAGAGGTATTACCCAATTTAAGACATAGGCATATGGTGAGTGTTCTAGGACACTGTGTGATTACTCAACAGGACACTCCACAAACAACAAGCACAGTCTTCATTGTATTTGAGTACATCTCAAATGTGTCATTGAGGAATCAACTTACTGATTGGAGAAAGAGGGACATGCTGAAATGGCCACAAAGAATGGCAATCAGCATCGGCATTGCAAGAGGAGTCCAGTTCTTACACACAGGAGTTGCTCCTGGCATATTTGGCAACAACTTAAAGATTGAGAACATTCTGTTGGATGATAGTCTCAATGCAAGAGTCAGTGGATACAATATTCCTTTGCCATCCAAGAGTGCAGTTAATGAACCAAATTCAACCAATCAAATTGGCAGCACAAATAATGCAGAAAAGGAAGATATCTATCAGCTTGGTGTTATTCTACTTGAAGTTATCACTGGCAAACAAATCACATCCTCCAGTGAAATAGAGGAGCTAAAGGAAGAGCTGGAGAGTGGTTCATCAGAAGCAGCATCAGTACTAAGAAGTGTAATTGATCCTTCCCTGAGGGGAAGTTATGCATATGAATCAATGAGGACTGCAGTTCAGATTACCATCAATTGTCTCTCCAAGGTTCCTAGTAAACGCCCTTCAATAGAGGATGTTCTCTGGAATTTACAGTACTCAATGCAAGTTCAAGAGTCATGGACCAGCAGTGGAAACCTCAGCACAAAATTTTAA 2211 0.3994 MKKLWVTFCYLFPAIILVLLIPTSIAQLTPSETRILFQVQRLVEYPQVLQGWTKWTNFCFLPPSPSLKIVCSNGHVTELTIIGNKSSPSSHSLKGASWNSGQALSGSFSIDSLFTVVTKLSNLKMLSLVNLGLWGPLPAKINRFWSMEVLNISSNFIIGEIPSSLSSMKNLRSLVLADNLFNGSVPDLKSLTSLEELNLGGNKLGPEFPSVGKNLVSINLRKNSMRSQIPPQLAHLDKLQIFDISSNKFFGNIPSNIFSLPSLKYLSLSSNQLSGNLSMEMTCSSALTFVDISHNLLVGKLPSCIVSMSSKAKVLYSGNCLSTKRLNDQQHPSSYCKKDAALAVKPTTRNLKKESGMKLGLVLGVTIGVVIGIAGLLVLLIVIILRKSKAKTSYHNKDRSIADKFSARASPRPNIDARRVPQTMRIAAVGLPPYLNFTSEEIEDATNNFDPSNLIGEGSQGQLYKGWLRDGSVVLVHCVKIKQKGLPHSIMQDLEVLPNLRHRHMVSVLGHCVITQQDTPQTTSTVFIVFEYISNVSLRNQLTDWRKRDMLKWPQRMAISIGIARGVQFLHTGVAPGIFGNNLKIENILLDDSLNARVSGYNIPLPSKSAVNEPNSTNQIGSTNNAEKEDIYQLGVILLEVITGKQITSSSEIEELKEELESGSSEAASVLRSVIDPSLRGSYAYESMRTAVQITINCLSKVPSKRPSIEDVLWNLQYSMQVQESWTSSGNLSTKF* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02615 736 SUPERFAMILY L domain-like 70 323 - -
Rops2g02615 736 SUPERFAMILY Protein kinase-like (PK-like) 429 716 IPR011009 -
Rops2g02615 736 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Rops2g02615 736 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 422 522 - -
Rops2g02615 736 Pfam Leucine Rich repeat 191 207 IPR001611 GO:0005515
Rops2g02615 736 Coils Coil 653 673 - -
Rops2g02615 736 Pfam Leucine rich repeat 238 297 IPR001611 GO:0005515
Rops2g02615 736 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 533 732 - -
Rops2g02615 736 Pfam Leucine Rich Repeat 148 167 IPR001611 GO:0005515
Rops2g02615 736 Pfam Protein kinase domain 452 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02615 736 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 213 717 - -
Rops2g02615 736 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 215 341 - -
Rops2g02615 736 Gene3D Phosphorylase Kinase; domain 1 415 532 - -
Rops2g02615 736 ProSiteProfiles Protein kinase domain profile. 449 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02615 736 Gene3D Ribonuclease Inhibitor 213 347 IPR032675 -
Rops2g02615 736 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 29 213 - -
Rops2g02615 736 Gene3D Transferase(Phosphotransferase) domain 1 533 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02615 Rops-Chr2 43302922 43306464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02615 24 672 Miscellaneous Gene Families AT2G02780 49.403 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Rops2g02615 Pkinase 3.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02615 - - gmx:100803061 1100.12