Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02611 ATGGGTAACTGCCTAGATTCTTCAGCGAAAGTAGATGCGGGTCATAATTCCAGAAGCCCTTCTGCATCAGGAATGTCAAAAACTAGTCCTTCATCTGCTCCTTCCAATTTATCTACTCTATCACACAGTGAACTAAGTGATGCCTCAAATCTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCTCCAAATCTTAAGGCCTTCACATTCAATGAGTTACAAAATGCCACCAGAAACTTTCGTCCAGACAGTCTTCTTGGTGAAGGAGGATTTGGTTATGTTTATAAAGGGTGGATTGATGAACACACGTTTACGGCTTCAAAACCTGGATCAGGAATGGTTGTTGCTGTAAAGAAACTAAAGCCAGAAGGTTTACAAGGTCATAAGGAATGGTTGACTGAAGTTGAGTACCTTGGGCAACTTCACCATGAAAATCTGGTTAAATTGATTGGATACTGCATGGAGGGAGAGAAACTGCTGTTGGTCTATGAGTTTATGCCTAAAGGGAGCTTAGAGAATCATCTCTTTAGAAGAGGACCCCAACCTCTTTCTTGGTCATTGAGGATGAAAGTGGCAATTGGTGCTGCCAGAGGACTCACTTTTCTTCACAATGCCAAATCACAAGTCATATACCGTGATTTTAAAGCATCTAATATCCTACTAGACGCAGACTTCAATGCAAAACTCTCTGACTTTGGCTTAGCAAAAGCTGGCCCTACGGGTGATAGAACTCATGTCTCCACTCAAGTTATGGGTACTCGGGGATATGCAGCACCTGAATATGTTGCAACAGGTCGGCTAACAACGAAAAGTGATGTATACAGCTTTGGGGTTGTGATGCTTGAACTTTTATCTGGTAGACGTGCTGTTGATAGAACAAAAGCAGGTATAGAGCAAAATCTGGTAGATTGGGCAAAACCATATTTGGGTGACAAAAGAAGACTATTTAGGATTATGGACACCAAATTGGAGGGACAATACCCACAAAAAGGAGCTTACATGGCTGCTAATCTTGCTCTAAAATGCCTTAATCGTGAATCCAAATCAAGGCCTACAATGACAGAGGTTTTAGCAACTTTGGAACAGATTGAAGTCTCCAAAATTACAGGGAGAAACTACCAAACAGAACAGAAGAGAGTTCATGTCACTTTAAGAAAGTATACTGCACAAAATCGGTCCTCTTTAAATGTTATTACTCCAACTAAACTCCCATTGCCATCTCACCGATTATCTACTCGTGTACATTAA 1251 0.4125 MGNCLDSSAKVDAGHNSRSPSASGMSKTSPSSAPSNLSTLSHSELSDASNLPTPRSEGEILSSPNLKAFTFNELQNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTASKPGSGMVVAVKKLKPEGLQGHKEWLTEVEYLGQLHHENLVKLIGYCMEGEKLLLVYEFMPKGSLENHLFRRGPQPLSWSLRMKVAIGAARGLTFLHNAKSQVIYRDFKASNILLDADFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYVATGRLTTKSDVYSFGVVMLELLSGRRAVDRTKAGIEQNLVDWAKPYLGDKRRLFRIMDTKLEGQYPQKGAYMAANLALKCLNRESKSRPTMTEVLATLEQIEVSKITGRNYQTEQKRVHVTLRKYTAQNRSSLNVITPTKLPLPSHRLSTRVH* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02611 416 CDD STKc_IRAK 87 364 - -
Rops2g02611 416 FunFam Probable serine/threonine-protein kinase PBL8 167 380 - -
Rops2g02611 416 MobiDBLite consensus disorder prediction 10 60 - -
Rops2g02611 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Rops2g02611 416 Pfam Protein tyrosine and serine/threonine kinase 85 360 IPR001245 GO:0004672|GO:0006468
Rops2g02611 416 FunFam Serine/threonine-protein kinase BIK1 48 166 - -
Rops2g02611 416 Gene3D Transferase(Phosphotransferase) domain 1 167 390 - -
Rops2g02611 416 ProSitePatterns Protein kinases ATP-binding region signature. 87 120 IPR017441 GO:0005524
Rops2g02611 416 SUPERFAMILY Protein kinase-like (PK-like) 57 361 IPR011009 -
Rops2g02611 416 PANTHER OS01G0588500 PROTEIN-RELATED 39 365 - -
Rops2g02611 416 Gene3D Phosphorylase Kinase; domain 1 53 166 - -
Rops2g02611 416 ProSiteProfiles Protein kinase domain profile. 81 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02611 416 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02611 Rops-Chr2 43216346 43219386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02611 59 361 Glycoside Hydrolase AT3G07070 53.268 5.47e-112 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops2g02611 PK_Tyr_Ser-Thr 7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02611 - - gmx:100305401 697.582