Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02598 ATGGCATGCCTCCCTCATGGTCATGGTGAGCAGGTTGCTGCCACAACAAGCAGAGGAGTTGATGGCTACATACCTAGTTACCCGAGTCTGCCACCCTGGTTGATTCGCCAACATGCCACGGTGCATGCAACTTACGCATGCATGAACGTAGGAGATGGCTACCGCCTCCCCCACTGTTGCAACTCAACCTCTTTTGTAGTATATTATAAGAAAAGGACGACCCCATTCATCATAAGTATGAACAGGTACTTTGAGGCTACCAACGAGAAGCTTAGTATTGACATGAGGTTCAAGGTAAGGTTTGAAGGGGAGGATGCTACTGAGACTGACAAAAGAGTTTCGGGTACCATTGTTGAAGTGAAGATATTTCTCCTCAGTAGGTAA 384 0.4714 MACLPHGHGEQVAATTSRGVDGYIPSYPSLPPWLIRQHATVHATYACMNVGDGYRLPHCCNSTSFVVYYKKRTTPFIISMNRYFEATNEKLSIDMRFKVRFEGEDATETDKRVSGTIVEVKIFLLSR* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02598 127 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 61 121 IPR044835 GO:0003677|GO:0006355|GO:0009725
Rops2g02598 127 Pfam Auxin response factor 61 121 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Rops2g02598 127 Gene3D - 90 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02598 Rops-Chr2 42939655 42940038 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02598 63 121 B3 DNA Binding Superfamily AT4G23980 59.322 2.41e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02598 K14486 - gmx:100803911 81.6481