Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02577 ATGACACTTCGACCAAGTTCCTCTTTTTCCTCCGATGATTGGGCTTATGATGTCTTCCTCAGTTTTAGAGGTGCTGATACTCGAAATGGCTTCACTGGCAACCTTTATAAATCTCTTTATGATAAGGGAATCCACACCTTCATGGATGATGACGGGATTAGAAGAGGGGAAGAAATTACACCAGCCCTTTTCAAGGCAATTGAGCAATCTAGAATTGCCCTTGTTGTTTTCTCTGAAAACTATGCTTCCTCAACTTACTGTCTTGAAGAGCTTGTCAAAATCCTTGATTGCATAAAGAAAAAGGGTCGATTAGTTTGGCCAATTTTTTATGGAGTGAATCCATCTGATGTGCGGTACCAAAAAGGTTCTTGTGGAGAAGCATTGGCTAAGCATGAAGATAGATTCAAGAATAACAAGGAGAAGGTGCATAAGTGGAAGTTAGCTCTACAAGAAGCAGCTAATTTGTCTGGTTGGACTTTCGAATTAAATAACGGGTACGAATATAAATTTGTTCAGAAGATCGTTGAAGAGGTGTCCAAAAAGATAAACCGTTGCCCTTTACATGTTGCTGATTATCCAATTGGATTGGACTCTAGAGTGCAAGAGGTCAACTCACTTGTAGATGTTGGATCCAGTCAAGGAGTCAGGATGGTAGGGATTCATGGACTTGGTGGCATAGGTAAAACAACAATTGCTTGCAGAGTGTATAATCTCATTGCTGATCAATTTGAAGGTCAATGTTTTCTTGCTGATATTAGAGAAAACTCACGCAAGAATGGCTTAGTACAACTTCAGGAGACAATGCTTTGTGAAGTAATTGGGGAGAAGGGTATCAAGTTGGGGAGTATTAATAGGGGAAAGACAATGATCAAAAGCAAGCTTCAACGAAAGAAAGTTCTTTTGATTCTTGATGATGTAGATAAATTGGAGCAATTAAAAGCACTTGCTGGAGATCTTAGTTGGTTTGGTTATGGTAGCAAAATCATAATCACAACAAGGGATAAGCATTTGCTGCATGTACATGGTGTTGAAAGAACATATGAGGCAACAGGATTGAATGATGAAGAAGCTCTCGAGTTGTTTAGTTGGCATGCTTTTAAAAACAATGTGGTTGAACAAAGTTACATTGATATCTCAAACCACGCAATACTTTATTCCAATGGTCTACCGTTGGCTCTAGAAATAATAGGTTCTAACTTAAATGGTAAAACAATTTCTGAATGGAAATCTGCATTACATACCTACAAAAGAATTCCAGATGAAGATGTTCAGAATAAACTAAAAGTAAGCTATGATGGTTTGAAAGGAAATGAGAAGGATGTTTTCCTTGACTTGGCTTGTTTCTTTAAAGGTTACTATTTGAAATATGCCATAAATGTCTTGTTACAAGGTCGTGGCCTCTCACCAGAATATGCTATTGGAGTGTTGATTGATAAATCTCTCATAAAGATTGATCAATCTGGTTTTGTGAGAATCCATGACTTGGTAGAGGACATGGGCAGAGAAATTGTTAGGCAGGAATCGCCATCAGAACCTGGCAAATGCAGTAGATTATGGTTTTATGAGGATATTGTCGATGTTTTAGAAAATGACAAGGGAACCGACACAATCGAAGTAATCATGCTAAACTTGCCAAAGAATAGGGAAGTTCGGTGGAATGGAAGTGAGCTGAAGAAGATGAAAAACCTCAAAATACTTATCATTGAAAATGCTCACTTTTCTAGAGGCCCTGAACATCTCCCTAACAGTTTGAGAGTGCTAGAATGGTGGGGATATCCTTCACCAACTCTGCCACCAGAATTTGATCCAAGGAGACTTGTCAGTCTAGACTTGTCTAAGAGCTGCAATAGATTGGACAAACAAGTCGAACTCATGAAGTTTGAGTCTTTGAGTGAAATGTTTTTCGGAGATTGCAAATTCATTGAAAAAGTACCTGATATGTCCCGAGCCCCAAATTTAAAGAAGCTGTCTCTTGTTGACTGCGAGAACTTAGTAGAAGTTCATGATTCGGTCGGGTTTCTTGATAAACTTACAGTGTTGGATGTTGATGGATGCACCAATCTAAGGATTCTTCCCCACAGCTTCAAGTTAACATCTCTCGAATATCTGTCTCTCAGAGGGTGTTCAAGTCTCCAGAGTTTGTCAGATATATTAGAAGAAATGAAACATATAAAAAATCTTGATCTGAATGGAACAGCGATAGAAGAATTGCCAATTTCATTTAGAAATCTCATCGGGCTTCAATATTTAGTGCTGGACGGATGCTATATGCTTCATCACATCCCAAAAAGTATTCTCATGTTACCAAATCTTAAGATTGTGACAGCAACAAAATGTGGTTGGTATGTAAATTTGATCCTTGGCGAAGGTGAAGAACAAGAAAGATTGGGTTCATCCGATTATTCAAATGTTAGACATGATAAATTAAATTACAGCAATTTGACACCTGTCTTCTTCCCCAGTGTAGAATTCTTGGACCTAACTGGCTGTCCTCTCAGAATTCTTCCCGAATGCATCAGTGAATGTCGCTTTCTGGGGAATCTGGTTTTGGATGACTGCTTCTGTCTTCGAGAAATCAGAGGGGTTCCTCCAAAGATAAAATATCTTTCGGCAATAAACTGCATATCATTGACTCCCGAGTCTCGTAACAAGTTATTGAGTAAGAAATTACATGAGTGTCGGGGCGCAGAATTTATTCTTCCAGGGAAAAGGATACCACAATGGTTCGACCAGTGTACCACGGGATCATCCCTGTCATTCTGGTTTCGTAACAGATTCCCACCGATGGTTCTAGCTGTTGTTGGAGTTTTGGACATGCAGGGCCGTTTTTCCAGTTCAAGATTCCACTTTCTCATCAATGGGATTCAGAAGTTGCATCGCCATTTCACTGTTGGAAGAAGACCAGTAACGTCTCATATAGGTTTGTCCGATTTAAATATCAAATCCTATAATGATGAATTGGGAATTGTGTCTAGCGAGGATGGATGGAATCATGTTGAGGTTTCGTTTGGGGAACCTAGTGAAAGGGATTTTCCACGCACATGCAGAGTCGCGAAAGTAAACATAGTTTATATGGGAGTTCATGTGTACAAGCAAGAAACGAGCATGGAGGATGTCCGGTTTACAAATCCAAAGTCTCCAAAGAGAGCATATAGCCATTTTTCCATGCCTTATTCGGACCAAGATTTTCAACCATTGCTCAAAAAAAGTCGTGTATCACAACGCATGGAAATTTGTGAGGCACAGCATCAAATTGACAGTGGTTATCATGGTGTATCACAGAATTTATGGTTCATAATTTGCAGCATCGAAGCTCCTCCTAATGTTAAAATCCTGATATGGAACATTTGTCAAAATTCTTTGCCAACTTATGAATATCTTTTCAAGAGGAATATTGTAGATAGCCCACTCTGTCCCATTTGTGGAACAAAACCTGAAACTGTGGAACATGTGTTCCTGTTTTGCCCATGGACTCGACCCCTTTGGTTTGGAAGTGATTTCCAGTGGAGTATTGATGTCAATTCAGTTCAAAGCTTTCGACTTTGGCTTTGCCAGAAACTCGAGGAGATTAAAAGGGTACATACAAATAATGTCAACCAATCATGTGCTCTTCTGATGAATATTTGTTGGGCTATTTGGAATGGAAGGAATGAATTTGTTCTTGACGACCAACCTGTCAATCCTTTGATTTTAAGGCCAACAGAATACAAGAGATCAAGGTTACCCAGAAACAGGTCTGTGAACCGTGCATATGGTGGAGTTGTGTATGGAGGTGCTGCTAGAGAAAGGATCATTCGACCTTTCTTGGTTGAAGAGCAAAATATTGTGAAAAAGATTGGGAAGAGCAACGGATCTGAAGCAACAATCACCTCCTTTGAAGCAGCATTTCGTGTTTCTCATGAATATTTCAGCCTGTTGCTTTTGTCGTCATCTTCTCTAGTGACTAGAGCTGTCATTTTGGCTGTTCGCCCATGGGAAAAAAACTAA 3987 0.3945 MTLRPSSSFSSDDWAYDVFLSFRGADTRNGFTGNLYKSLYDKGIHTFMDDDGIRRGEEITPALFKAIEQSRIALVVFSENYASSTYCLEELVKILDCIKKKGRLVWPIFYGVNPSDVRYQKGSCGEALAKHEDRFKNNKEKVHKWKLALQEAANLSGWTFELNNGYEYKFVQKIVEEVSKKINRCPLHVADYPIGLDSRVQEVNSLVDVGSSQGVRMVGIHGLGGIGKTTIACRVYNLIADQFEGQCFLADIRENSRKNGLVQLQETMLCEVIGEKGIKLGSINRGKTMIKSKLQRKKVLLILDDVDKLEQLKALAGDLSWFGYGSKIIITTRDKHLLHVHGVERTYEATGLNDEEALELFSWHAFKNNVVEQSYIDISNHAILYSNGLPLALEIIGSNLNGKTISEWKSALHTYKRIPDEDVQNKLKVSYDGLKGNEKDVFLDLACFFKGYYLKYAINVLLQGRGLSPEYAIGVLIDKSLIKIDQSGFVRIHDLVEDMGREIVRQESPSEPGKCSRLWFYEDIVDVLENDKGTDTIEVIMLNLPKNREVRWNGSELKKMKNLKILIIENAHFSRGPEHLPNSLRVLEWWGYPSPTLPPEFDPRRLVSLDLSKSCNRLDKQVELMKFESLSEMFFGDCKFIEKVPDMSRAPNLKKLSLVDCENLVEVHDSVGFLDKLTVLDVDGCTNLRILPHSFKLTSLEYLSLRGCSSLQSLSDILEEMKHIKNLDLNGTAIEELPISFRNLIGLQYLVLDGCYMLHHIPKSILMLPNLKIVTATKCGWYVNLILGEGEEQERLGSSDYSNVRHDKLNYSNLTPVFFPSVEFLDLTGCPLRILPECISECRFLGNLVLDDCFCLREIRGVPPKIKYLSAINCISLTPESRNKLLSKKLHECRGAEFILPGKRIPQWFDQCTTGSSLSFWFRNRFPPMVLAVVGVLDMQGRFSSSRFHFLINGIQKLHRHFTVGRRPVTSHIGLSDLNIKSYNDELGIVSSEDGWNHVEVSFGEPSERDFPRTCRVAKVNIVYMGVHVYKQETSMEDVRFTNPKSPKRAYSHFSMPYSDQDFQPLLKKSRVSQRMEICEAQHQIDSGYHGVSQNLWFIICSIEAPPNVKILIWNICQNSLPTYEYLFKRNIVDSPLCPICGTKPETVEHVFLFCPWTRPLWFGSDFQWSIDVNSVQSFRLWLCQKLEEIKRVHTNNVNQSCALLMNICWAIWNGRNEFVLDDQPVNPLILRPTEYKRSRLPRNRSVNRAYGGVVYGGAARERIIRPFLVEEQNIVKKIGKSNGSEATITSFEAAFRVSHEYFSLLLLSSSSLVTRAVILAVRPWEKN* 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02577 1328 Gene3D Ribonuclease Inhibitor 530 924 IPR032675 -
Rops2g02577 1328 Pfam zinc-binding in reverse transcriptase 1094 1162 IPR026960 -
Rops2g02577 1328 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Rops2g02577 1328 SUPERFAMILY L domain-like 505 885 - -
Rops2g02577 1328 Gene3D - 10 186 IPR035897 -
Rops2g02577 1328 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 769 IPR044974 GO:0006952
Rops2g02577 1328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 445 IPR027417 -
Rops2g02577 1328 Gene3D - 351 435 IPR042197 -
Rops2g02577 1328 Gene3D - 1230 1281 - -
Rops2g02577 1328 SMART till_3 15 155 IPR000157 GO:0007165
Rops2g02577 1328 Pfam NB-ARC domain 211 421 IPR002182 GO:0043531
Rops2g02577 1328 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Rops2g02577 1328 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Rops2g02577 1328 Pfam TIR domain 15 183 IPR000157 GO:0007165
Rops2g02577 1328 Gene3D - 187 345 IPR027417 -
Rops2g02577 1328 PRINTS Disease resistance protein signature 386 400 - -
Rops2g02577 1328 PRINTS Disease resistance protein signature 217 232 - -
Rops2g02577 1328 PRINTS Disease resistance protein signature 695 711 - -
Rops2g02577 1328 PRINTS Disease resistance protein signature 293 307 - -
Rops2g02577 1328 SUPERFAMILY "Winged helix" DNA-binding domain 422 529 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02577 Rops-Chr2 42477729 42485202 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02577 5 779 WRKY Transcription Factor Family AT4G12020 32.156 1.87e-91 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02577 - - gmx:100810811 1773.06