Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g02577 | ATGACACTTCGACCAAGTTCCTCTTTTTCCTCCGATGATTGGGCTTATGATGTCTTCCTCAGTTTTAGAGGTGCTGATACTCGAAATGGCTTCACTGGCAACCTTTATAAATCTCTTTATGATAAGGGAATCCACACCTTCATGGATGATGACGGGATTAGAAGAGGGGAAGAAATTACACCAGCCCTTTTCAAGGCAATTGAGCAATCTAGAATTGCCCTTGTTGTTTTCTCTGAAAACTATGCTTCCTCAACTTACTGTCTTGAAGAGCTTGTCAAAATCCTTGATTGCATAAAGAAAAAGGGTCGATTAGTTTGGCCAATTTTTTATGGAGTGAATCCATCTGATGTGCGGTACCAAAAAGGTTCTTGTGGAGAAGCATTGGCTAAGCATGAAGATAGATTCAAGAATAACAAGGAGAAGGTGCATAAGTGGAAGTTAGCTCTACAAGAAGCAGCTAATTTGTCTGGTTGGACTTTCGAATTAAATAACGGGTACGAATATAAATTTGTTCAGAAGATCGTTGAAGAGGTGTCCAAAAAGATAAACCGTTGCCCTTTACATGTTGCTGATTATCCAATTGGATTGGACTCTAGAGTGCAAGAGGTCAACTCACTTGTAGATGTTGGATCCAGTCAAGGAGTCAGGATGGTAGGGATTCATGGACTTGGTGGCATAGGTAAAACAACAATTGCTTGCAGAGTGTATAATCTCATTGCTGATCAATTTGAAGGTCAATGTTTTCTTGCTGATATTAGAGAAAACTCACGCAAGAATGGCTTAGTACAACTTCAGGAGACAATGCTTTGTGAAGTAATTGGGGAGAAGGGTATCAAGTTGGGGAGTATTAATAGGGGAAAGACAATGATCAAAAGCAAGCTTCAACGAAAGAAAGTTCTTTTGATTCTTGATGATGTAGATAAATTGGAGCAATTAAAAGCACTTGCTGGAGATCTTAGTTGGTTTGGTTATGGTAGCAAAATCATAATCACAACAAGGGATAAGCATTTGCTGCATGTACATGGTGTTGAAAGAACATATGAGGCAACAGGATTGAATGATGAAGAAGCTCTCGAGTTGTTTAGTTGGCATGCTTTTAAAAACAATGTGGTTGAACAAAGTTACATTGATATCTCAAACCACGCAATACTTTATTCCAATGGTCTACCGTTGGCTCTAGAAATAATAGGTTCTAACTTAAATGGTAAAACAATTTCTGAATGGAAATCTGCATTACATACCTACAAAAGAATTCCAGATGAAGATGTTCAGAATAAACTAAAAGTAAGCTATGATGGTTTGAAAGGAAATGAGAAGGATGTTTTCCTTGACTTGGCTTGTTTCTTTAAAGGTTACTATTTGAAATATGCCATAAATGTCTTGTTACAAGGTCGTGGCCTCTCACCAGAATATGCTATTGGAGTGTTGATTGATAAATCTCTCATAAAGATTGATCAATCTGGTTTTGTGAGAATCCATGACTTGGTAGAGGACATGGGCAGAGAAATTGTTAGGCAGGAATCGCCATCAGAACCTGGCAAATGCAGTAGATTATGGTTTTATGAGGATATTGTCGATGTTTTAGAAAATGACAAGGGAACCGACACAATCGAAGTAATCATGCTAAACTTGCCAAAGAATAGGGAAGTTCGGTGGAATGGAAGTGAGCTGAAGAAGATGAAAAACCTCAAAATACTTATCATTGAAAATGCTCACTTTTCTAGAGGCCCTGAACATCTCCCTAACAGTTTGAGAGTGCTAGAATGGTGGGGATATCCTTCACCAACTCTGCCACCAGAATTTGATCCAAGGAGACTTGTCAGTCTAGACTTGTCTAAGAGCTGCAATAGATTGGACAAACAAGTCGAACTCATGAAGTTTGAGTCTTTGAGTGAAATGTTTTTCGGAGATTGCAAATTCATTGAAAAAGTACCTGATATGTCCCGAGCCCCAAATTTAAAGAAGCTGTCTCTTGTTGACTGCGAGAACTTAGTAGAAGTTCATGATTCGGTCGGGTTTCTTGATAAACTTACAGTGTTGGATGTTGATGGATGCACCAATCTAAGGATTCTTCCCCACAGCTTCAAGTTAACATCTCTCGAATATCTGTCTCTCAGAGGGTGTTCAAGTCTCCAGAGTTTGTCAGATATATTAGAAGAAATGAAACATATAAAAAATCTTGATCTGAATGGAACAGCGATAGAAGAATTGCCAATTTCATTTAGAAATCTCATCGGGCTTCAATATTTAGTGCTGGACGGATGCTATATGCTTCATCACATCCCAAAAAGTATTCTCATGTTACCAAATCTTAAGATTGTGACAGCAACAAAATGTGGTTGGTATGTAAATTTGATCCTTGGCGAAGGTGAAGAACAAGAAAGATTGGGTTCATCCGATTATTCAAATGTTAGACATGATAAATTAAATTACAGCAATTTGACACCTGTCTTCTTCCCCAGTGTAGAATTCTTGGACCTAACTGGCTGTCCTCTCAGAATTCTTCCCGAATGCATCAGTGAATGTCGCTTTCTGGGGAATCTGGTTTTGGATGACTGCTTCTGTCTTCGAGAAATCAGAGGGGTTCCTCCAAAGATAAAATATCTTTCGGCAATAAACTGCATATCATTGACTCCCGAGTCTCGTAACAAGTTATTGAGTAAGAAATTACATGAGTGTCGGGGCGCAGAATTTATTCTTCCAGGGAAAAGGATACCACAATGGTTCGACCAGTGTACCACGGGATCATCCCTGTCATTCTGGTTTCGTAACAGATTCCCACCGATGGTTCTAGCTGTTGTTGGAGTTTTGGACATGCAGGGCCGTTTTTCCAGTTCAAGATTCCACTTTCTCATCAATGGGATTCAGAAGTTGCATCGCCATTTCACTGTTGGAAGAAGACCAGTAACGTCTCATATAGGTTTGTCCGATTTAAATATCAAATCCTATAATGATGAATTGGGAATTGTGTCTAGCGAGGATGGATGGAATCATGTTGAGGTTTCGTTTGGGGAACCTAGTGAAAGGGATTTTCCACGCACATGCAGAGTCGCGAAAGTAAACATAGTTTATATGGGAGTTCATGTGTACAAGCAAGAAACGAGCATGGAGGATGTCCGGTTTACAAATCCAAAGTCTCCAAAGAGAGCATATAGCCATTTTTCCATGCCTTATTCGGACCAAGATTTTCAACCATTGCTCAAAAAAAGTCGTGTATCACAACGCATGGAAATTTGTGAGGCACAGCATCAAATTGACAGTGGTTATCATGGTGTATCACAGAATTTATGGTTCATAATTTGCAGCATCGAAGCTCCTCCTAATGTTAAAATCCTGATATGGAACATTTGTCAAAATTCTTTGCCAACTTATGAATATCTTTTCAAGAGGAATATTGTAGATAGCCCACTCTGTCCCATTTGTGGAACAAAACCTGAAACTGTGGAACATGTGTTCCTGTTTTGCCCATGGACTCGACCCCTTTGGTTTGGAAGTGATTTCCAGTGGAGTATTGATGTCAATTCAGTTCAAAGCTTTCGACTTTGGCTTTGCCAGAAACTCGAGGAGATTAAAAGGGTACATACAAATAATGTCAACCAATCATGTGCTCTTCTGATGAATATTTGTTGGGCTATTTGGAATGGAAGGAATGAATTTGTTCTTGACGACCAACCTGTCAATCCTTTGATTTTAAGGCCAACAGAATACAAGAGATCAAGGTTACCCAGAAACAGGTCTGTGAACCGTGCATATGGTGGAGTTGTGTATGGAGGTGCTGCTAGAGAAAGGATCATTCGACCTTTCTTGGTTGAAGAGCAAAATATTGTGAAAAAGATTGGGAAGAGCAACGGATCTGAAGCAACAATCACCTCCTTTGAAGCAGCATTTCGTGTTTCTCATGAATATTTCAGCCTGTTGCTTTTGTCGTCATCTTCTCTAGTGACTAGAGCTGTCATTTTGGCTGTTCGCCCATGGGAAAAAAACTAA | 3987 | 0.3945 | MTLRPSSSFSSDDWAYDVFLSFRGADTRNGFTGNLYKSLYDKGIHTFMDDDGIRRGEEITPALFKAIEQSRIALVVFSENYASSTYCLEELVKILDCIKKKGRLVWPIFYGVNPSDVRYQKGSCGEALAKHEDRFKNNKEKVHKWKLALQEAANLSGWTFELNNGYEYKFVQKIVEEVSKKINRCPLHVADYPIGLDSRVQEVNSLVDVGSSQGVRMVGIHGLGGIGKTTIACRVYNLIADQFEGQCFLADIRENSRKNGLVQLQETMLCEVIGEKGIKLGSINRGKTMIKSKLQRKKVLLILDDVDKLEQLKALAGDLSWFGYGSKIIITTRDKHLLHVHGVERTYEATGLNDEEALELFSWHAFKNNVVEQSYIDISNHAILYSNGLPLALEIIGSNLNGKTISEWKSALHTYKRIPDEDVQNKLKVSYDGLKGNEKDVFLDLACFFKGYYLKYAINVLLQGRGLSPEYAIGVLIDKSLIKIDQSGFVRIHDLVEDMGREIVRQESPSEPGKCSRLWFYEDIVDVLENDKGTDTIEVIMLNLPKNREVRWNGSELKKMKNLKILIIENAHFSRGPEHLPNSLRVLEWWGYPSPTLPPEFDPRRLVSLDLSKSCNRLDKQVELMKFESLSEMFFGDCKFIEKVPDMSRAPNLKKLSLVDCENLVEVHDSVGFLDKLTVLDVDGCTNLRILPHSFKLTSLEYLSLRGCSSLQSLSDILEEMKHIKNLDLNGTAIEELPISFRNLIGLQYLVLDGCYMLHHIPKSILMLPNLKIVTATKCGWYVNLILGEGEEQERLGSSDYSNVRHDKLNYSNLTPVFFPSVEFLDLTGCPLRILPECISECRFLGNLVLDDCFCLREIRGVPPKIKYLSAINCISLTPESRNKLLSKKLHECRGAEFILPGKRIPQWFDQCTTGSSLSFWFRNRFPPMVLAVVGVLDMQGRFSSSRFHFLINGIQKLHRHFTVGRRPVTSHIGLSDLNIKSYNDELGIVSSEDGWNHVEVSFGEPSERDFPRTCRVAKVNIVYMGVHVYKQETSMEDVRFTNPKSPKRAYSHFSMPYSDQDFQPLLKKSRVSQRMEICEAQHQIDSGYHGVSQNLWFIICSIEAPPNVKILIWNICQNSLPTYEYLFKRNIVDSPLCPICGTKPETVEHVFLFCPWTRPLWFGSDFQWSIDVNSVQSFRLWLCQKLEEIKRVHTNNVNQSCALLMNICWAIWNGRNEFVLDDQPVNPLILRPTEYKRSRLPRNRSVNRAYGGVVYGGAARERIIRPFLVEEQNIVKKIGKSNGSEATITSFEAAFRVSHEYFSLLLLSSSSLVTRAVILAVRPWEKN* | 1329 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g02577 | 1328 | Gene3D | Ribonuclease Inhibitor | 530 | 924 | IPR032675 | - | |
Rops2g02577 | 1328 | Pfam | zinc-binding in reverse transcriptase | 1094 | 1162 | IPR026960 | - | |
Rops2g02577 | 1328 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 6 | 158 | IPR035897 | - | |
Rops2g02577 | 1328 | SUPERFAMILY | L domain-like | 505 | 885 | - | - | |
Rops2g02577 | 1328 | Gene3D | - | 10 | 186 | IPR035897 | - | |
Rops2g02577 | 1328 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 16 | 769 | IPR044974 | GO:0006952 | |
Rops2g02577 | 1328 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 183 | 445 | IPR027417 | - | |
Rops2g02577 | 1328 | Gene3D | - | 351 | 435 | IPR042197 | - | |
Rops2g02577 | 1328 | Gene3D | - | 1230 | 1281 | - | - | |
Rops2g02577 | 1328 | SMART | till_3 | 15 | 155 | IPR000157 | GO:0007165 | |
Rops2g02577 | 1328 | Pfam | NB-ARC domain | 211 | 421 | IPR002182 | GO:0043531 | |
Rops2g02577 | 1328 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 12 | 184 | - | - | |
Rops2g02577 | 1328 | ProSiteProfiles | TIR domain profile. | 14 | 182 | IPR000157 | GO:0007165 | |
Rops2g02577 | 1328 | Pfam | TIR domain | 15 | 183 | IPR000157 | GO:0007165 | |
Rops2g02577 | 1328 | Gene3D | - | 187 | 345 | IPR027417 | - | |
Rops2g02577 | 1328 | PRINTS | Disease resistance protein signature | 386 | 400 | - | - | |
Rops2g02577 | 1328 | PRINTS | Disease resistance protein signature | 217 | 232 | - | - | |
Rops2g02577 | 1328 | PRINTS | Disease resistance protein signature | 695 | 711 | - | - | |
Rops2g02577 | 1328 | PRINTS | Disease resistance protein signature | 293 | 307 | - | - | |
Rops2g02577 | 1328 | SUPERFAMILY | "Winged helix" DNA-binding domain | 422 | 529 | IPR036390 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g02577 | Rops-Chr2 | 42477729 | 42485202 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g02577 | 5 | 779 | WRKY Transcription Factor Family | AT4G12020 | 32.156 | 1.87e-91 | 325 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g02577 | - | - | gmx:100810811 | 1773.06 |