LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g02575	ATGAAGACCAACACACAATGCAGCAACACATGCAACTTGCGCGTGCATGGGTTTAAAAATACTGGACTTTGCATGGTGGCTTCTCGGTTCGTAGGAAACATGCCACAGAATGATATACAAGTCGTGTTGCATGTGCCAAGGAATGCACAAAATGCTGGCTACAAAGCTGCAATTGTTAATGATAATGAAGATGGTGGTGTCTTGGTTGCAACTATGTCTGCAGTGCTTGCCACTTGTTTCTTCGTCCGCGGGCATCGCATTAGAAGAGAAAGGCCTCAAGCTTCTCGTGTTCGTGAGTTTCATGGTGCTATCTGCCTTGAAGATTATTATGTTGGAGAGAAGCTCAGGATTCTGCCCTGCTGTCACAAGTTTCATGCTGCCGGTGTGGACCCTTGGCTTACATCATGGAGAACCTTTTGTCCAGTTTGCAAACAATCCACACCTCTACTATCATCAAGCCCAACATCTGTGGCTTCCTCTGTCATATCTTCTTCGAGGTCATCATTAGCTTCATCTCCAACAATACGAATTGCCCGTCCAACACAGTCTTCATCTGTTTCTCATAGCCACTCTTTAGCTAGTACCCCTTGTCTTCAGCCATCTTTTAGGTCCTACTATCAATCCTCTTCCATAAGCATCAGCAGAAGCTCTGTAGATCTTAGAAATGCATCCCAAAGATCTCTAGCTTCTCACTTGAATTCACCACATTCCATGGGATACCTTTCTTTGTCATCCCTTAACTCTAGGTACATGTCTCCACACATTCCAAGTCCAAGCAATGCTTCAACAAGTTTCATTGGTTCATCCAGTCACCGCCAACATCCACTACCTCAAATGGGTGAGGCTTGTTCTTGTGGACCTTACTACACGTGGGATCCAACATGA	885	0.4508	MKTNTQCSNTCNLRVHGFKNTGLCMVASRFVGNMPQNDIQVVLHVPRNAQNAGYKAAIVNDNEDGGVLVATMSAVLATCFFVRGHRIRRERPQASRVREFHGAICLEDYYVGEKLRILPCCHKFHAAGVDPWLTSWRTFCPVCKQSTPLLSSSPTSVASSVISSSRSSLASSPTIRIARPTQSSSVSHSHSLASTPCLQPSFRSYYQSSSISISRSSVDLRNASQRSLASHLNSPHSMGYLSLSSLNSRYMSPHIPSPSNASTSFIGSSSHRQHPLPQMGEACSCGPYYTWDPT*	295

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops2g02575	294	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	85	149	IPR013083	-
	Rops2g02575	294	PANTHER	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	102	144	-	-
	Rops2g02575	294	Pfam	Ring finger domain	103	144	IPR001841	-
	Rops2g02575	294	MobiDBLite	consensus disorder prediction	255	275	-	-
	Rops2g02575	294	SUPERFAMILY	RING/U-box	103	150	-	-
	Rops2g02575	294	MobiDBLite	consensus disorder prediction	255	277	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops2g02575	Rops-Chr2	42419827	42432036	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g02575	100	271	C3H Transcription Factor Family	AT1G22670	46.286	5.05e-34	126

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g02575	K15692		-	gmx:100791248	255.758