Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02574 ATGACACTGCGACCAAGTTCCTCTTTTTCCTCCGATGATCGGACTTATGATGTCTTCCTCAGTTTTAGAGGTGCTGATACTCGAAGTGGCTTCACTGGCAACCTTTATAAATCTCTTTATGATAAGGGAATCCACACCTTCATGGATGATGACGGGATTAGAAGAGGGGAAGAAATTACACCAGCCCTTTTCAAGGCAATTGAGCAATCTAGAATTGCCCTTGTTGTTTTCTCTGAAAACTATGCTTCCTCAACTTACTGTCTTGAAGAGCTTGTCAAAATCCTTGATTGCATAAAGAAAAAGGGTCGATTAGTTTGGCCAATTTTTTATGGAGTGAATCCATCTGATGTGCGGTACCAAAAAGGTTCTTATGGAGAAGCATTGGCTAAGCATGAAGATAGATTCAAGAATAACAAGGAGAAGGGAACCGATGCAATCGAAGTAATCATGCTAAACTTGCCAAAGAATAAGGAAGTTCGGTGGAGTGGAAGTGAGCTGAAGAAGATGAAAAACCTTAAAATACTTACCATTGAAAATGCTCACTTTTCTAGAGGCCCCGAACATCTTCCAAACAGTTTGAGAGTGCTGGAATGGTGGGGATATCCTTCACCATCTCTGCCACCTGGATTTGATCCAAGGAGACTTGTCAGTTTAGACTTGTCTAAGAGTTGCAATAGATTGGACAAACAAGTCGAACTCATGAAGTTTGAGTCTTTGAGTGAAATGTTTTTCGAAGATTGCAAATTCATTGAAAAAGTACCTGATATGTCCCGAGCCCCAAATTTAAAGAAGCTGTATCTTAATGACTGCAAGAACTTAGTAGAAGTTCATGATTCGGTCGGGTTTCTTGATAAACTTACAGTGTTGGATGTTGATGGATGCACCAATCTAAGGATTCTTCCCCACAGCTTCAAGTTAACATCTCTCGAATATCTCTGTCTCAGAAGGTGTTCAAGTCTCCAGAGTTTGCCAAATATATTAGAAGAAATGAAACATATAAAAAATGTTGATCTGTGTGAAACAGCTATAGAAGAATTGCCAATTTCATTTAGAAATCTCATCGGGCTTCAATATTTATTGCTGAACGGATGCGATATGCTTCATCACATCCCAAAAAGTATTTTGATGTTACCAAATCTTAAGAGTGTGACAGCAATACAATGTGATTGGTGTGAATATTTGATCCTTGGCGAAGGTGAAGAACAAGAAAGATTGGGTTCATCCGATTATTCAAATGTTAGACATGATAAATTAAATTACAGCAATTTGACACCTGTCTTCTTCCCCAGTGTAGAATTCTTGGACCTAACTGGCTGTGCTCTCAAAATTCTTCCCGAATGCATCAGTGAATGTCGCTTTCTGGGGAATCTGGTTTTGGATAACTGTAGGAAGCTTGAAGAAATCAGAGGGTTTCCTCCAAAGATAAAATATCTTTCGGCAATAAACTGCATATCATTGACTCTCGAGTCTAAAAGCAAGTTATTGAGTCAGAAATTACATGAGTTTCGGGAAACAGAATTTATTCTTCCAGGGAAAAGGATACCACAATGGTTCGACCACTGTACCACGGGACCATCCCTGTCTTTCTGGTTTCGTAACAAATTCCCACTGATGGTTCTAGCTGTTGTTGGAGTTTTGGACTGTGTTCTCAGTTCAAAATTCTACTTTATGATCAATGGGTTTCAGATGTTGCATTGCCATTTCACTGTTAGAAGAAAACAAGTAAAGTCTCATATATTTTTGTCCGATTTAAATGTCAAATCCTATAGAGATGAAATGAGAATTGTGTCTAGCGAGGATGGGTGGAATCATGTTGAGGTTTCGTGTGTGGAACCTAGTGAAAGGGATTTTCCACGCACATGCAGAGTCGAGAAAAGAAACATATTTTATATGGGAGTTCATCTGTACAAGCAAGAAACGAGCATCGAGGATGTCCGGTTTATAAATCCAGTGTCTCCAAAGAGAGCATATAACGATTTTTCCAGGCCTTATTTGGACCAAGATTTTCAACCATCGCTCGAAAAAAGTTGTGTATCACAACGCATGGAAATTTGTGAGGCACAGCGTCAAATTGACACTGTTTATCATGGTGTATCACAGAATTTATGGTTGGCAATTTGCAGCACTGAAGCTCCTCCTAATGTTAAAATCCTTATATGGAATATTTGCCAAAATTCTTTGCCAACTTATGAATATCTTTTCAAGAGGAAGCATGTAGATAGCCCACTCTGTCCCATTTGTGGAACAGAACCTGAAACTGTGGAACATGTGTTCCTGTTTTGCCCATGGACTCGACCCCTTTGGTTTGGAAGTGATTTCCATTGGAGTATTGATGTCAATTCAGTTCAAAGCTTTCAACTTTGGCTTTGCCAGAAACTCGAGGAGCTTAAAAGGGTACATACAAATAATGTCAACCAATCATGTGCTCTTTTGATGAATATTTGTTGGGCTATTTGGAATGGAAGGAATGAATTTGTTCTTGAAGACCAACCTGTCAATCCTTTGATTTTAAGGCCACCAGAATACAAGAGATCAAGGTTACCCAGAAACAGGAGGACTGTGAACCGTGCATATGGTGTTGTTTTGTCTGGAGGTGCTGTTAGAGAAAGGGTCATTCGACCTTTCTCGGTTGAAGAGCAAAATATTGTGAAAAAGGTCCTGAAGATCCAAAACGCAAAGGGAAAGCAAGTTTTGAACAGCGAGTTTCAAGAAGAAGATGAAGATCTTTATTAA 2733 0.3926 MTLRPSSSFSSDDRTYDVFLSFRGADTRSGFTGNLYKSLYDKGIHTFMDDDGIRRGEEITPALFKAIEQSRIALVVFSENYASSTYCLEELVKILDCIKKKGRLVWPIFYGVNPSDVRYQKGSYGEALAKHEDRFKNNKEKGTDAIEVIMLNLPKNKEVRWSGSELKKMKNLKILTIENAHFSRGPEHLPNSLRVLEWWGYPSPSLPPGFDPRRLVSLDLSKSCNRLDKQVELMKFESLSEMFFEDCKFIEKVPDMSRAPNLKKLYLNDCKNLVEVHDSVGFLDKLTVLDVDGCTNLRILPHSFKLTSLEYLCLRRCSSLQSLPNILEEMKHIKNVDLCETAIEELPISFRNLIGLQYLLLNGCDMLHHIPKSILMLPNLKSVTAIQCDWCEYLILGEGEEQERLGSSDYSNVRHDKLNYSNLTPVFFPSVEFLDLTGCALKILPECISECRFLGNLVLDNCRKLEEIRGFPPKIKYLSAINCISLTLESKSKLLSQKLHEFRETEFILPGKRIPQWFDHCTTGPSLSFWFRNKFPLMVLAVVGVLDCVLSSKFYFMINGFQMLHCHFTVRRKQVKSHIFLSDLNVKSYRDEMRIVSSEDGWNHVEVSCVEPSERDFPRTCRVEKRNIFYMGVHLYKQETSIEDVRFINPVSPKRAYNDFSRPYLDQDFQPSLEKSCVSQRMEICEAQRQIDTVYHGVSQNLWLAICSTEAPPNVKILIWNICQNSLPTYEYLFKRKHVDSPLCPICGTEPETVEHVFLFCPWTRPLWFGSDFHWSIDVNSVQSFQLWLCQKLEELKRVHTNNVNQSCALLMNICWAIWNGRNEFVLEDQPVNPLILRPPEYKRSRLPRNRRTVNRAYGVVLSGGAVRERVIRPFSVEEQNIVKKVLKIQNAKGKQVLNSEFQEEDEDLY* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02574 910 ProSiteProfiles TIR domain profile. 14 150 IPR000157 GO:0007165
Rops2g02574 910 Gene3D Ribonuclease Inhibitor 325 521 IPR032675 -
Rops2g02574 910 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 126 IPR044974 GO:0006952
Rops2g02574 910 SUPERFAMILY L domain-like 147 496 - -
Rops2g02574 910 Gene3D - 13 184 IPR035897 -
Rops2g02574 910 Gene3D Ribonuclease Inhibitor 214 324 IPR032675 -
Rops2g02574 910 Pfam zinc-binding in reverse transcriptase 700 768 IPR026960 -
Rops2g02574 910 Gene3D - 836 901 - -
Rops2g02574 910 Pfam TIR domain 16 139 IPR000157 GO:0007165
Rops2g02574 910 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 132 IPR035897 -
Rops2g02574 910 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 171 - -
Rops2g02574 910 SMART till_3 15 166 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02574 Rops-Chr2 42402137 42409307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02574 213 403 WRKY Transcription Factor Family AT4G12020 31.771 4.35e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02574 - - gmx:100810811 943.34