Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g02538 | ATGGCAACTGTGTTTTCTGTAGGTTCAGGTTCTGCTTTTCTTTTCCACAGTAGGAACTTGTCCTTGGTAACCAACAAAGGACCATTCCTTCAGCTGAAGAGCCCTCTGTCTGCAAAGTCAGTTGCTTCTTTGGGAACTGAGACATCAGTGTCTCCAGCAGTTCAAACCTTCTGGCAGTGGATGAAGGATGAAGGTGTTATCTCAGCCAAGACCCCAGTGAAGGCTGGTGTGGTCCCAGAAGGCCTTGGACTGATTGCACTCAAAGATATTTCTAGGAATGAGGTTGTTTTGCAAGTACCCAAGAGGCTGTGGATAAACCCTGATGCAGTGGCAGCTTCAGAGATTGGGAATGTGTGCAGTGGGTTGAAGCCATGGTTGGCTGTTGCACTTTTTCTAATAAGAGAGAGGTCAAGGGATGAATCTCTTTGGAAACACTACTTCAGTATTCTGCCACAGGAAACTGATTCCACTTTATATTGGTCAGAGGAGGAGCTTTCACAGCTTCAAGGTACTCAACTTCTGAATACAACACTGTCTGTGAAAGAATATGTGAAGAATGAATTTCTGAGACTGGAAAAAGAAATCATTCTCCCTAATAAGAAGCTTTTCCCTTCTCCTATAACACTGGATGACTTCTTCTGGGCATTTGGAATTCTCAGATCAAGAGCATTTTCTCGCCTTCGCAATGAAAATTTGGTTATAATTCCACTAGCAGACTTGATAAACCACAGTGCCAGGGTAACTACAGAAGACCATGCTTATGAAATTAAAGGAGCAGCAGGCCTTTTCTCTTGGGATTACCTATTTTCCCTAAGGAGCCCCCTTTCTGTTAAGGCTGGGGAACAGATATATATCCAATATGATTTAAACAAAAGCAATGCAGAGTTGGCTCTGGACTACGGTTTCATTGAACCAAATGCTGATCGGAATGCATATACCCTGACACTGGAGATATCAGAGTCAGACCCCTTTTTTGGTGATAAATTAGACATTGCTGAGACCAATGGTTTTGGTGAGAAAGCGTACTTTGACATATTCTACAACCAGCCACTTCCACCAGGGTTGTTTCCATATCTGAGACTAGTAGCACTAGGGGGCACTGATGCTTTCTTATTGGAATCAATATTCAGAAACTCCATTTGGGATCATCTTCAATTGCCTGTGAGCCGTGACAATGAGGAGCTAATATGCAGAGTGGTTCGAGAGGCCTGCAAATCTGCTCTTGCTGGTTATCATACAACCATTGAAGAGGGTCAAAAGTTGAAAGAAGGAAATCTAGATTCAAGGCTTGCGATAGCAGTTGGAATAAGAGAAGGGGAGAAGATGGTCCTGCAGCAAATTGATGAGATCTTCAAGGAGAAAGAATTGGAATTGGACCAGTTAGAATATTATCAAGAAAGGAGGCTCAAGGATCTTGGACTTTGTGGAGAAAATGGTGATATCCTTGGGGACCTTGGAAAGTTCTTTTAA | 1470 | 0.4286 | MATVFSVGSGSAFLFHSRNLSLVTNKGPFLQLKSPLSAKSVASLGTETSVSPAVQTFWQWMKDEGVISAKTPVKAGVVPEGLGLIALKDISRNEVVLQVPKRLWINPDAVAASEIGNVCSGLKPWLAVALFLIRERSRDESLWKHYFSILPQETDSTLYWSEEELSQLQGTQLLNTTLSVKEYVKNEFLRLEKEIILPNKKLFPSPITLDDFFWAFGILRSRAFSRLRNENLVIIPLADLINHSARVTTEDHAYEIKGAAGLFSWDYLFSLRSPLSVKAGEQIYIQYDLNKSNAELALDYGFIEPNADRNAYTLTLEISESDPFFGDKLDIAETNGFGEKAYFDIFYNQPLPPGLFPYLRLVALGGTDAFLLESIFRNSIWDHLQLPVSRDNEELICRVVREACKSALAGYHTTIEEGQKLKEGNLDSRLAIAVGIREGEKMVLQQIDEIFKEKELELDQLEYYQERRLKDLGLCGENGDILGDLGKFF* | 490 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g02538 | 489 | FunFam | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic | 304 | 468 | - | - | |
Rops2g02538 | 489 | PIRSF | RMT_SET | 1 | 488 | IPR011192 | GO:0009507|GO:0030785 | |
Rops2g02538 | 489 | PANTHER | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE | 49 | 431 | - | - | |
Rops2g02538 | 489 | Pfam | SET domain | 81 | 287 | IPR001214 | GO:0005515 | |
Rops2g02538 | 489 | CDD | SET_RBCMT | 65 | 303 | IPR044431 | GO:0016279|GO:0018022 | |
Rops2g02538 | 489 | SUPERFAMILY | RuBisCo LSMT C-terminal, substrate-binding domain | 311 | 482 | IPR036464 | - | |
Rops2g02538 | 489 | ProSiteProfiles | Plant LSMT protein-lysine methyltransferase family profile. | 18 | 487 | IPR011192 | GO:0009507|GO:0030785 | |
Rops2g02538 | 489 | FunFam | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic | 50 | 302 | - | - | |
Rops2g02538 | 489 | Gene3D | set domain protein methyltransferase, domain 1 | 49 | 303 | - | - | |
Rops2g02538 | 489 | SMART | set_7 | 71 | 294 | IPR001214 | GO:0005515 | |
Rops2g02538 | 489 | SUPERFAMILY | SET domain | 51 | 308 | IPR046341 | - | |
Rops2g02538 | 489 | Pfam | Rubisco LSMT substrate-binding | 320 | 444 | IPR015353 | - | |
Rops2g02538 | 489 | ProSiteProfiles | SET domain profile. | 64 | 288 | IPR001214 | GO:0005515 | |
Rops2g02538 | 489 | Gene3D | - | 304 | 468 | IPR036464 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g02538 | 49 | 243 | NAC Transcription Factor Family | AT3G56570 | 28.780 | 8.48e-11 | 62.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Rops2g02538 | SET | 1.4e-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g02538 | K00592 | - | gmx:100818113 | 850.892 |