Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02525 ATGGTATCAGTTTCTGGGGACCCGATCCAGAGGTTAGGTGCTTACATGTTGGAGGGTCTAAGAGCAAAGTTTGAATCATCAGGGAGTCTAATCTACAAATCCTTGAAGTGTGAACAACCAACAGGCAAAGAACTGTTGAGTTACATGCACATCTTGTATCAGGTTTGCCCATATTGGAAGTTTGCTTACACATCTGCAAATGTTGTCATCGGAGAAGCAATGCAAGATGAATCAAGAATTCATATAATTGACTTCCAAATTGCTCAGGGCACACAATGGTTATTACTTATCAAAGCTCTTGCATGTCGTCCAAGTGGACCTCCATTCATTCGTGTAACTGGCGTTGATGATTCCCAATCATATCATGCTCGGGGTGGAGGACTTCATATTGTAGGAAAACGGCTCTCAGATTACGCCAAGTCTTGCGGAGTACCATTTGAGTTCCATAGTGCTGCCATGTCGGGCTGTGAGGTTGAACTAGAAAACCTTGTAGTTATACCTGGGGAAGCTCTGGCTGTGAATTTCCCTTTCATTTTGCACCACATGCCGGATGAGAGTGTGAGCACAGAGAACCATAGAGACAGACTATTGAGATTGGTAAAGAGCTTGTCACCAAAGGATAAACCACGGTTTTCCTAG 639 0.4382 MVSVSGDPIQRLGAYMLEGLRAKFESSGSLIYKSLKCEQPTGKELLSYMHILYQVCPYWKFAYTSANVVIGEAMQDESRIHIIDFQIAQGTQWLLLIKALACRPSGPPFIRVTGVDDSQSYHARGGGLHIVGKRLSDYAKSCGVPFEFHSAAMSGCEVELENLVVIPGEALAVNFPFILHHMPDESVSTENHRDRLLRLVKSLSPKDKPRFS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02525 212 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 206 IPR005202 -
Rops2g02525 212 Pfam GRAS domain family 2 206 IPR005202 -
Rops2g02525 212 ProSiteProfiles GRAS family profile. 1 212 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02525 Rops-Chr2 41305822 41307856 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02525 1 206 GRAS Transcription Factor Family AT4G17230 71.359 9.86e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops2g02525 GRAS 1.6e-63 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02525 - - gmx:100817987 374.4