Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02524 ATGATTCCAAAGTTGGACTTGAAAGAAGTCCTCATTCGATGTGCACAAGCCGTGTCAGATGATGACATTCAAACAACACCAGGCTTGATGAATAATGTGTCAGCAAAGATGGTATCAGTTTCTGGGGACCCGATCCAGAGGTTAGGTGCTTACATGTTGGAGGGTCTAAGAGCAAAGTTTGAATCATCAGGGAGTCTAATCTACAAATCCTTGAAGTGTGAACAACCAACAGGCAAAGAACTGTTGAGTTACATGCACATCTTGTATCAGGTTTGCCCATATTGGAAGTTTGCTTACACATCTGCAAATGTTGTCATCGGAGAAGCAATGCAAGATGAATCAAGAATTCATATAATTGACTTCCAAATTGCTCAGGGCACACAATGGTTATTACTTATCAAAGCTCTTGCATGTCGTCCAAGTGGACCTCCATTCATTCGTGTAACTGGCGTTGGTGATTCCCAATCATATCATGCTCGGGGTGGAGGACTTCATATTGTAGGAAAACGGCTCTCAGATTACGCCAAGTCTTGCGGAGTACCATTTGAGTTCCATAGTGCTGCCATGTCGGGCTGTGAGGTTGAACTAGAAAACCTTGTAGTTATACAGGGGAAGCTCTGGCTGTGA 627 0.4354 MIPKLDLKEVLIRCAQAVSDDDIQTTPGLMNNVSAKMVSVSGDPIQRLGAYMLEGLRAKFESSGSLIYKSLKCEQPTGKELLSYMHILYQVCPYWKFAYTSANVVIGEAMQDESRIHIIDFQIAQGTQWLLLIKALACRPSGPPFIRVTGVGDSQSYHARGGGLHIVGKRLSDYAKSCGVPFEFHSAAMSGCEVELENLVVIQGKLWL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02524 208 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 197 IPR005202 -
Rops2g02524 208 Pfam GRAS domain family 7 202 IPR005202 -
Rops2g02524 208 ProSiteProfiles GRAS family profile. 1 208 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02524 Rops-Chr2 41292436 41293062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02524 1 199 GRAS Transcription Factor Family AT4G17230 65.327 3.45e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops2g02524 GRAS 6.5e-55 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02524 - - gmx:100817987 353.599