Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02513 ATGATTGGGATTGCTTTCATAGGCTCTGGAAAAACTCTGGTCTTTGTGTTGCCCATGATCATGGTGGCAATGCAGGAGGAAATTATGATGCCTATAGTTCCTGGAGAAGGACCATTTGGTTTGATTATTTGTCCATCAAGGGAACTGGCTAGGCAAACTTATGATGTGGTTGAACAATTCCTGATACCTTTGAAGGAAGCTGGATATCCAGAGCTGAGGCCTCTGCTTTGTATTGGTGGAGTGGACATGAGATCGCAGCTTGAGATTGTGAAGAAGGGAGTTCATATTGTTGTTGCCACTCCTGGGAGGTTGAAGGATATGTTGGCCAAGAAGAACATGAATCTTGATAACTGTAGGTATTTAACATTAGATGAAATTGATCGATTGGTAGATTTGGGATTTGAAGATGATATAAGAGAAGTTTTTGATCACTTCAAAGCTCAAAGGCGTACTCTTTTATTTTCTACCACCATGCCAACCAAAATTGAACTTTGCTAG 498 0.4076 MIGIAFIGSGKTLVFVLPMIMVAMQEEIMMPIVPGEGPFGLIICPSRELARQTYDVVEQFLIPLKEAGYPELRPLLCIGGVDMRSQLEIVKKGVHIVVATPGRLKDMLAKKNMNLDNCRYLTLDEIDRLVDLGFEDDIREVFDHFKAQRRTLLFSTTMPTKIELC* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02513 165 Pfam DEAD/DEAH box helicase 3 162 IPR011545 GO:0003676|GO:0005524
Rops2g02513 165 Gene3D - 1 165 IPR027417 -
Rops2g02513 165 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 165 IPR014001 -
Rops2g02513 165 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 2 163 - -
Rops2g02513 165 SMART ultradead3 1 165 IPR014001 -
Rops2g02513 165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 162 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02513 Rops-Chr2 41065855 41066352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02513 1 159 Eukaryotic Initiation Factors Gene Family AT3G13920 31.447 2.56e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02513 K13116 - gmx:100814127 310.842