Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops2g02496 | ATGGCCAAGCTTGGTGAACAGGCCGAGAGATATGAAGAAATGGTTGAATGCATGAAGACAGTAGCAAAACTTGATCTTGAGCTAACCGTGGAAGAGAGGAACCTTCTCTCAGTGGGATATAAAAATGTGATCGGTGCAAGGAGAGCCTCATGGCGCATTATGTCTTCAATTGAACAGAAGGAAGAGTCCAAGGGAAATGAGAACAATGTGAAAATAATCAAGAGTTACCGCCAAAAGGTTGAGGAGGAACTAACGAAAATTTGCAGTGACATTCTGACAATTATTGACCAGCATCTGGTTCCTTCTTCCACCTCAGGAGAAGCCACCGTTTTCTACCATAAGATGAAAGGTGACTATTGTCGATATCTTGCTGAGTTCAAGACCGACCAAGAAAGGAAGGAAGCAGCAGAGCAGTCACTAAAGGCATATGAGGCTGCTTCAGCCACTGCAAACACAGATCTTCCATCAACGCATCCAATCCGTCTTGGACTTGCACTCAACTTCTCAGTTTTCTATTATGAGATAATGAACTCTCCTGAAAGGGCATGTCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTAGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTAACTCTCTGGACCTCAGATTTACCTGAGGAAGGAGGTGAAGAATTCAAAACAGAAGAAGCCAAACCTGCTGAACCTGAGCATTGA | 741 | 0.4359 | MAKLGEQAERYEEMVECMKTVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKIIKSYRQKVEEELTKICSDILTIIDQHLVPSSTSGEATVFYHKMKGDYCRYLAEFKTDQERKEAAEQSLKAYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEEFKTEEAKPAEPEH* | 247 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops2g02496 | 246 | ProSitePatterns | 14-3-3 proteins signature 1. | 33 | 43 | IPR023409 | - | |
| Rops2g02496 | 246 | Pfam | 14-3-3 protein | 1 | 223 | IPR023410 | - | |
| Rops2g02496 | 246 | ProSitePatterns | 14-3-3 proteins signature 2. | 205 | 224 | IPR023409 | - | |
| Rops2g02496 | 246 | MobiDBLite | consensus disorder prediction | 228 | 246 | - | - | |
| Rops2g02496 | 246 | FunFam | 14-3-3 protein epsilon | 1 | 237 | - | - | |
| Rops2g02496 | 246 | SUPERFAMILY | 14-3-3 protein | 1 | 225 | IPR036815 | - | |
| Rops2g02496 | 246 | PANTHER | 14-3-3 PROTEIN | 1 | 225 | IPR000308 | - | |
| Rops2g02496 | 246 | Coils | Coil | 183 | 203 | - | - | |
| Rops2g02496 | 246 | PRINTS | 14-3-3 protein zeta signature | 107 | 129 | IPR000308 | - | |
| Rops2g02496 | 246 | PRINTS | 14-3-3 protein zeta signature | 142 | 168 | IPR000308 | - | |
| Rops2g02496 | 246 | PRINTS | 14-3-3 protein zeta signature | 169 | 195 | IPR000308 | - | |
| Rops2g02496 | 246 | PRINTS | 14-3-3 protein zeta signature | 27 | 56 | IPR000308 | - | |
| Rops2g02496 | 246 | PRINTS | 14-3-3 protein zeta signature | 196 | 225 | IPR000308 | - | |
| Rops2g02496 | 246 | PRINTS | 14-3-3 protein zeta signature | 76 | 100 | IPR000308 | - | |
| Rops2g02496 | 246 | SMART | 1433_4 | 1 | 236 | IPR023410 | - | |
| Rops2g02496 | 246 | Coils | Coil | 126 | 153 | - | - | |
| Rops2g02496 | 246 | PIRSF | 14-3-3 | 1 | 235 | IPR000308 | - | |
| Rops2g02496 | 246 | MobiDBLite | consensus disorder prediction | 226 | 246 | - | - | |
| Rops2g02496 | 246 | Gene3D | - | 1 | 234 | IPR036815 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops2g02496 | Rops-Chr2 | 40806688 | 40811112 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Rops2g02496 | 1 | 243 | 14-3-3 family | AT1G26480 | 84.739 | 3.15e-156 | 432 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops2g02496 | - | K06630 | csin:114261719 | 446.432 |