Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02474 ATGGAAGAAGTTTGTCTAAATAATGAGCCACTTTTTGATGAAAGCGATGAGTTTGATGTCGAGGGGAACTCTTCCATAGTAGAACATGATCTTGAATCTTTAAACTCACAACCAAAGAACTCCCCACTTCCAACTGTGGGTCTGGAGTTTGATTCCTTTGATGAAGTTTACAACTTTTACAATATCTATGCAAAGGAACAAGGCTTTGGCATCAGAGTGAGCAATTCATGGTTTAGATCAAAGAGAAAAGAGCGCTACAGAGCAAAACTTAGCTGCAGTAGTGCTGGTTTCAAGAAAAAGAGTGAGGCCAATAATCCAAGACCAGAAACAAGAACTGGTTGTCCTGCGATGATAGTGATTAAATTGGTTGACTCCAAGAGATGGAGGATAGTGGAAGTTGAGCTTCAACACAACCATCAAGTGAGTCCACAGAGCAAACGGTTCTACAAGTCACATAAGAAAATGATCCTTGCAGCCAGAGAGTCACAACCACTGCCAGAGCCTCTAACAGAAGTACATACCATCAAGTTGTATCGAACAAATGTCGTGGATGTTGGTCAGAGTGATTACTCAAATTTTGAAGAAAGTCATGACACCAATTTTGATAGTTTTAAATATTTGGAACTTAGAGAAGGGGATGCCAATGCTATATATAATTATTTTTGCCGAATGAAGTTGACCAATCCAAATTTCTTTTACTTGTTTGATATTGATGATGATGGGCACCTAAAAAATGTGTTCTGGGCTGATTCCAGGTCAAGGGTTGCTTATAATTGCTTTAATGACACTGTTACTATAGACACAACTTGTTTGGCAAACAAATATGAGATCCCTTTGATATCATTTGTGGGTGTGAACCATCATGGACATTCTGTACTATTGGGTTGTGCCTTCCTTGGACATGAATCAGTGGATTATTTTGTGTGGATATTCAAGGCATGGCTTGAGTGTATGCTTGGTCGTCCTCCTCAAGTCGTTATTACTGACCAGTGCAAACCCCTACAAATTGCAGTTGCTCAGGTTTTCCCTCATGCTCGACATTGTTATTCTTTGCAGTATATCATGCAAAGAGTTCCAGAAAAGTTGGGAGGTCTGCATGGATATGAAGCAATCAGAAGACAGCTGCATAATGCTGTGTATGAGTCATTAAAGATAGTTGAGTTTGAAACTTCTTGGGCTGATATGATTAAATGTCATGGACTGGGAGATAACAAGTGGCTTCAGACGTTGTATAAAGATAGGCATCAGTGGGTTCCTGTTTACCTAAAAGACACTTCTTTTATAGGAATGATCCCAACAAAAGAAAACGAAGGCCTCACTGCATTTTTTGATGGATATGTGCATAAACATACATCATTTAAGGAGTTTCTTGACAAGTGTGACCTAGCTCTTCACAGGAAGCACTTGAAAGAAGCCATGGCAGATTTGGAGTCTAGAAAATTAAACTTTGAATTGAAGACAAGATCTAACTTTGAGGTGCAGCTTTCAAAGATGTATACAAAAGAAATCTTTAAAAAGTTTCAATCTGAGGTTGAGGGCATGTACTCCTGCTTCAACACAAGACAGGTAAATGTAAATGGATCTATAATAACATACATTGTGAAAGAACGAGTTGAAGGTGAGGGAAACGAGAAGGGAGTTAAAAGTTTTGAAGTTTTATATGAGACTACAGGATTGGATATGCGTTGCATTTGCAGTTTGTTCAATTACAAAGGGTATCTATGTAGGCATGCATTGAATGTTCTCAATTATAATGGTGTTGAGGAAATCCCATCTCGGTATATCCTGCAACGTTGGAAGAGTGATTTCAAACAAAGGTTTAATCAATACCATGTCTCTGGTAATAATGATATCTACAACCCTGTTTATTGGTGTACTCATCTCTTTAACAATGCTCTTCCGGTGTTAGAAGTAGGGGCACAGTCACAGGAGCATTATATGATTGCTTTAAAAGAATTGGAGGAGTTGTTAGACAAGTTTGATATAGTGGATAATAACTTGCTGTAA 2007 0.3837 MEEVCLNNEPLFDESDEFDVEGNSSIVEHDLESLNSQPKNSPLPTVGLEFDSFDEVYNFYNIYAKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMIVIKLVDSKRWRIVEVELQHNHQVSPQSKRFYKSHKKMILAARESQPLPEPLTEVHTIKLYRTNVVDVGQSDYSNFEESHDTNFDSFKYLELREGDANAIYNYFCRMKLTNPNFFYLFDIDDDGHLKNVFWADSRSRVAYNCFNDTVTIDTTCLANKYEIPLISFVGVNHHGHSVLLGCAFLGHESVDYFVWIFKAWLECMLGRPPQVVITDQCKPLQIAVAQVFPHARHCYSLQYIMQRVPEKLGGLHGYEAIRRQLHNAVYESLKIVEFETSWADMIKCHGLGDNKWLQTLYKDRHQWVPVYLKDTSFIGMIPTKENEGLTAFFDGYVHKHTSFKEFLDKCDLALHRKHLKEAMADLESRKLNFELKTRSNFEVQLSKMYTKEIFKKFQSEVEGMYSCFNTRQVNVNGSIITYIVKERVEGEGNEKGVKSFEVLYETTGLDMRCICSLFNYKGYLCRHALNVLNYNGVEEIPSRYILQRWKSDFKQRFNQYHVSGNNDIYNPVYWCTHLFNNALPVLEVGAQSQEHYMIALKELEELLDKFDIVDNNLL* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02474 668 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 660 IPR031052 GO:0006355
Rops2g02474 668 Pfam MULE transposase domain 264 356 IPR018289 -
Rops2g02474 668 Pfam FAR1 DNA-binding domain 58 142 IPR004330 -
Rops2g02474 668 Coils Coil 466 486 - -
Rops2g02474 668 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Rops2g02474 668 SMART 26again6 561 588 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02474 Rops-Chr2 40445585 40451508 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops2g02474 MULE 1.5e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02474 K17604 - gmx:100811666 1216.45