Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02473 ATGAAGTTAGGACCCGGAATCATCATCATCATTTCTCTCGTGCTTGTGTTGTGTGCCCCATTTTCTTCTTCTTCTTCGAAACCCAAAGACCCATTCCTTGGAATCGCTCCCGAAGATGAGAAGTATTACAAATCTTCCGATGTAATAAAATGTAAAGATGGATCCGGGAAATTCAACAAAGCGCAGCTCAATGATGATTTCTGTGACTGCCCTGATGGGACCGATGAACCTGGTACATCAGCATGTCCGCGTGGAAAATTTTTTTGTCCGAATGCAGGACATGTTCCTATGTACCTGTTTTCATCTAGAGTGAATGATGGAATTTGCGATTGCTGTGATGGAAATGATGAATACGATGGTAAAGCAAAGTGCCCAAATACCTGCTGGGAGGCTGGGAAAGTTGCTCGAGATAAGCTGAAGAAAAAGATTGCCACATATCAAGAGGGCGTCAAATTGCGGAAGCAAGAAATTGAACAAGCTAAATTAGGTCTGGAGAAGGATGAGGCAGAACTTTCAAAATTGAAAAAAGAAGAAAGTGTACTCAAAGGGATTGTGCAACAGCTAAAGGAGCATAAAGAACAAATAGAGAAAGCAGAGGAGAAGGGGCGTTTATGGAAGGAAAAAGAAGAGAAACAGAGAAAGGAGGCTGAGGAGAAGGCTAATCAAGAAGAAATAAAAGCCGATGAAGGAGATAAGGGACACGAAAATGAAGCTGGAAAGGATTCCCATGTTGAAGACAATACTGTGGCTAGTGACCATGATACAATTGGAATTCTAGAGGATTCTCCTGCAGATAAGGATGAAGCAAAGGACAGGTTAGCAGAGATACATGATAATTATGATGTAGCCACTGATAGTCCTGGAAGTGAAGGTTCATTGCTTAATAAAGTAGAAGAGAATGCAAAAGAAGCTGAGGGAGAAACTGTTAAATCTGAAACTGATTTTACGACTGGGAAGAAAGAGTCTTCTGATGAAATCATCAATACGGGAAAAGACGTATCTGAAAATACTGAGGGATTATCAAAGGAGGAATTGGGCAGGCTTGTTGCTTCTCGTTGGACAGGAGAAGATGTTGGTAAGAAAAGTGCTGAAGCTGATACCGCATTAGACAATGAAGATCAGGAAGATCTTCCAAATGGCACAAACAACGAAGAAGATGATGGCTATGCTTCTGAAACTGACGATGACAATCACAAATATGATGATGACAATCACAAATATGACGAAGAAGATGAAAATGATGAAGAATTTCGAGAGAATGAGCATGACGACTTTAGTTCCTCCTACAAATCTGACACTGATACTGAACCAGACTTGTCAGATAATCCTTCTTGGTTGGAGAAAATACAGAAAACTGTGCGGAATATTTTTCAGGCTGTTAATATATTCCAGACTCCATTGAACCAGTCAGATACTGCTCGTGTACGCAAGGAATATGACGAATCAAGTACTAAGTTGTCTAAAATACAGACTAGGATATCGGGCCTGACACAAAAGCTAAAACATGATTTTGGTCCAGCAAAGGAGTTTTATTCATTCTATGATCGTTGCTTTGAGAGCAAGCAGAACAAGTACACTTACAAAGTCTGCCCCTATAAACAGGCTTCTCAGGAGGAGGGCTATTCCACCACCCGTTTGGGTCGGTGGGACAAATTTGAGGATTCATACAAAGTAATGGTGTTTTCTAATGGTGATAAATGCTGGAATGGTCCTGATAGGAGTTTGAAGGTCAGGCTAAAATGCGGGTTGAAGTATGAGATTACTGATGTAGATGAACCGAGCCGTTGCGAGTATGTAGCTTTATTATCTACCCCAGCCCTTTGTCAGGAGGAAAAGCTGAAGGAGTTAGAACACAAGCTAGACTTACTGAATTCAGAACAACCAGCAAACCATGACGAGTTGTGA 1905 0.411 MKLGPGIIIIISLVLVLCAPFSSSSSKPKDPFLGIAPEDEKYYKSSDVIKCKDGSGKFNKAQLNDDFCDCPDGTDEPGTSACPRGKFFCPNAGHVPMYLFSSRVNDGICDCCDGNDEYDGKAKCPNTCWEAGKVARDKLKKKIATYQEGVKLRKQEIEQAKLGLEKDEAELSKLKKEESVLKGIVQQLKEHKEQIEKAEEKGRLWKEKEEKQRKEAEEKANQEEIKADEGDKGHENEAGKDSHVEDNTVASDHDTIGILEDSPADKDEAKDRLAEIHDNYDVATDSPGSEGSLLNKVEENAKEAEGETVKSETDFTTGKKESSDEIINTGKDVSENTEGLSKEELGRLVASRWTGEDVGKKSAEADTALDNEDQEDLPNGTNNEEDDGYASETDDDNHKYDDDNHKYDEEDENDEEFRENEHDDFSSSYKSDTDTEPDLSDNPSWLEKIQKTVRNIFQAVNIFQTPLNQSDTARVRKEYDESSTKLSKIQTRISGLTQKLKHDFGPAKEFYSFYDRCFESKQNKYTYKVCPYKQASQEEGYSTTRLGRWDKFEDSYKVMVFSNGDKCWNGPDRSLKVRLKCGLKYEITDVDEPSRCEYVALLSTPALCQEEKLKELEHKLDLLNSEQPANHDEL* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02473 634 MobiDBLite consensus disorder prediction 258 279 - -
Rops2g02473 634 MobiDBLite consensus disorder prediction 296 328 - -
Rops2g02473 634 Coils Coil 294 314 - -
Rops2g02473 634 Gene3D - 510 608 IPR009011 -
Rops2g02473 634 Coils Coil 157 228 - -
Rops2g02473 634 MobiDBLite consensus disorder prediction 420 437 - -
Rops2g02473 634 MobiDBLite consensus disorder prediction 207 443 - -
Rops2g02473 634 MobiDBLite consensus disorder prediction 369 391 - -
Rops2g02473 634 SUPERFAMILY Mannose 6-phosphate receptor domain 519 608 IPR009011 -
Rops2g02473 634 MobiDBLite consensus disorder prediction 392 406 - -
Rops2g02473 634 ProSiteProfiles MRH domain profile. 515 610 IPR044865 -
Rops2g02473 634 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 13 634 IPR039794 -
Rops2g02473 634 Pfam Glucosidase II beta subunit-like protein 476 634 IPR036607 -
Rops2g02473 634 MobiDBLite consensus disorder prediction 207 250 - -
Rops2g02473 634 Pfam Glucosidase II beta subunit-like 26 176 IPR028146 -
Rops2g02473 634 Coils Coil 606 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02473 Rops-Chr2 40416732 40429513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02473 21 634 Calmodulin-binding Proteins AT5G56360 59.113 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02473 K08288 - gmx:100807083 931.013