Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02466 ATGAAAGAGAGTGGTAGGAAGCAAGGTGCACCCTCACCTTGTGCTGCATGCAAGCTCCTAAGAAGAAGGTGTACCCAAGATTGTGTTTTTGCTCCTTATTTCCCAGCTGATGAACCCCAGAAGTTTGCAAATGTGCATAAAGTGTTTGGTGCTAGTAATGTCAACAAGATGCTTCAGGACTTACCAGAGCATCAGAGAGGGGATGCAGTGAGTAGCATGGTGTATGAGGCAAATGCAAGAGTAAGAGACCCTGTATATGGCTGTGTAGGTGCCATTTCATCACTTCAACAACAAATTGATGCACTACAGACCCAATTGGCTGTGGCCCAAGCTGAGGCAGTGCACCTTAGGGTGCGCCAAAATGCATTCCTCTGGAACCAAGGGCATAGCCCCACTAGCCCAACCTATAGTGGCTCTCCATCACAAGCCAAGCCTATTTTTGACATGGACATGGTGGTGGACCAAGCTAACTATGGTGATTCAATGTGGTGA 492 0.4756 MKESGRKQGAPSPCAACKLLRRRCTQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLAVAQAEAVHLRVRQNAFLWNQGHSPTSPTYSGSPSQAKPIFDMDMVVDQANYGDSMW* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02466 163 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 127 - -
Rops2g02466 163 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Rops2g02466 163 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Rops2g02466 163 Coils Coil 92 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02466 Rops-Chr2 40286708 40291223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02466 1 163 AS2 family AT1G31320 74.118 2.94e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Rops2g02466 LOB 2.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02466 - - gmx:100306560 292.737