Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02448 ATGGCCACTTCAATAACTCTTCTCAAGATGCTCTCTGTCATTTTCATCCTCATCACTCTTTTCACATCCCAAGTTCTTGCTGATTGTGAAACCCAATCAAGAGACAGCTGCAATAACAAAGAAAAAGCTCAGCCTCTTAAAATCATAGCCATATTTGCCATCTTAGTCACTAGCATGATTGGTGTGTGCTTACCCTTGGTGACACGTTCAATCCCTGCCTTAAGACCCGAGAACAATCTCTTCATAATAGTGAAGTGTTTTGCGGCTGGTATCATTCTTGGGACTGGGTTCGTGCACGTGCTCCCTGATTCATTTGACATGTTGTGGTCTGATTGCCTGCAAGAGAAACCATGGCATGAGTTTCCATTTTCAGGGTTTGTGGCTATGTTCTCTGCAGTGATCACAATGATGGTGGACTCTTTGGCTACTACTATTTATACCAAAAAGTGTAAGACTGGAGTTAATCCAGATAGTCACCCTTCAGGTGGAGATCAAGAGATGGGTGCTGTCAATTTTGGGCATTTCCATGGTCATCATCATGAGGTCAAGACAGAAAGTGGAGAGTCACAACTTCTTCGTTATCGTGTAGTTGCCATGGTGTTAGAACTTGGAATTGTTGTTCATTCAGTGGTGATAGGACTTTCAGTGGGAGCCTCCAGTAACACATGCTCAATAAAAGGTCTTATAGCTGCCCTTTGCTTCCATCAAATGTTTGAAGGCATGGGACTTGGTGGTTGCATTCTCCAGGCTGAGTACAAATTCTTAAAGAAGGCCATCATGGTTTTCTTCTTCTCAGTTACAACCCCACTTGGAATTGCCATAGGACTTGCAATGTCCAACAGCTACAAAGAGAACAGCCCAACTGCACTAATCACTGTGGGATTGCTTAATGCATCATCTGCTGGTCTTTTAATCTACATGGCTTTGGTTGACCTACTCGCTGCTGATTTCATGGGTCCAAGGTTGCAGGGTAGCGTTAAGCTTCAATTAAAATCTTACATAGCAGTACTTTTGGGTGCTGGTGGCATGTCTCTCATGGCAAAATGGGCTTAA 1053 0.434 MATSITLLKMLSVIFILITLFTSQVLADCETQSRDSCNNKEKAQPLKIIAIFAILVTSMIGVCLPLVTRSIPALRPENNLFIIVKCFAAGIILGTGFVHVLPDSFDMLWSDCLQEKPWHEFPFSGFVAMFSAVITMMVDSLATTIYTKKCKTGVNPDSHPSGGDQEMGAVNFGHFHGHHHEVKTESGESQLLRYRVVAMVLELGIVVHSVVIGLSVGASSNTCSIKGLIAALCFHQMFEGMGLGGCILQAEYKFLKKAIMVFFFSVTTPLGIAIGLAMSNSYKENSPTALITVGLLNASSAGLLIYMALVDLLAADFMGPRLQGSVKLQLKSYIAVLLGAGGMSLMAKWA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02448 350 PANTHER ZINC/IRON TRANSPORTER 43 347 - -
Rops2g02448 350 NCBIfam ZIP zinc/iron transport family 29 350 IPR004698 GO:0005385|GO:0016020|GO:0071577
Rops2g02448 350 Pfam ZIP Zinc transporter 46 347 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02448 Rops-Chr2 39784342 39786151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02448 23 350 Inorganic Solute Cotransporters AT1G31260 65.282 4.18e-158 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02448 K14709 - gmx:100795511 560.066