Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02446 ATGGAAGGGAATAATAATGGGAATGGAGAGCAAATTGTGGATGTTGGATCTGTGGTAGAAGCTGTTTCTGCTGACGATGGAGATGCTCCACTTTATAACCTCGAAAGTCTCTGCATGCGTTGTGGCCAAAACGGGATTACGAGATTTTTATTGACTTTAATTCCTCACTTCAGAAAGATTTTGTTGTCGGCTTTTGAATGTCCTCACTGTGGTGAGAGGAACAATGAAGTACAATTTGCTGGTGAGATTCGACCGCGTGGTTGTTATTACACTCTGGAGATCCCATCAGGCCAACAAAAGATGCTAAATCGACAAGTGGTAAAATCAGAATCTGCTACCATTAAGATTCCTGAACTGGATTTTGAGATTCCGCCAGAGGCACAGCGTGGTAGTCTATCAACGGTGGAAGGCATACTAATGCGAGCTGTTGATGGACTTCAGGCCCTTCAAGAGGAACGCAAAAAAGTGGCTCCAGAGACGGCTGAAGCAATTGATCAGTTCTTGGTGAAATTGCGAGCCTGTGCAACAGGAGAATCATCTTTCACGTTGATTCTTGATGATCCTGCTGGAAACAGCTTCATTGAAAACCCGTTTGCACCATCATCTGATCCATCACTGACCATCAAGTTTTATGAGCGAACTCCTGAGCAACAAGCAGCATTGGGATATCTTGTTGATTCTACACAGATTGAAGGAAATCCTGATGAAGCACCTGAAGGAGGGGAAGCTCTGGCTGCTGATCAAATGAGGAGAGAACCACATGGGTCAATTGGGGCAGCTGCTGGTCATCGAGCCATTGCACAGAGTAATAGTGCAGAAATTGCAGAAGCCTTATTTCGATATACTGCACCAGAAGAGGTGATGACTTTCCCATCAACTTGTGGTGTTTGTACCACTAGGTGTGAAACTCGAATGTTTGTCACCAATATTCCATACTTCCAAGAAGTAATCGTTATGGCATCCACTTGTGATGCCTGTGGTTATCGCAACTCTGAGTTGAAACCCGGTGGGCGAATTCCTGAAAAAGGAAAAAAGATTACTCTCGTTGTGAAAAATGTTAATGATCTGAGCCGCGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCTGAGCTTGACTTGGAGCTGGCAAGTGGAACCCTGGGAGGAATTGTTACAACTGTTGAAGGTTTAATTATAAAAATTAGTGAAAGTCTTGAGAAGGTCCATGGGTTTACTTTTGGAGATAGTCTTGATGAACATAGAAGAAGCAAGTGGCTAGACTTCAAAGTGAGGCTAAACAAGCTTCTTAGCTTGGAAGAAGCTTGGACCCTAATTCTTGATGATGCATTAGCCAATTCTTTTATAGCACCTGCAACAGATGATCTAAAAGATGACAACCAATTAACATTTGAGGAGTACGAGAGGTCATGGGAGCAAAATGAAGAACTAGGTTTGAATGATATGGACACCTCTTCTGCAGATGCTGCTTATGAATCAACAAGTACTACTAAAATTGAGTGA 1506 0.427 MEGNNNGNGEQIVDVGSVVEAVSADDGDAPLYNLESLCMRCGQNGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIRPRGCYYTLEIPSGQQKMLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAVDGLQALQEERKKVAPETAEAIDQFLVKLRACATGESSFTLILDDPAGNSFIENPFAPSSDPSLTIKFYERTPEQQAALGYLVDSTQIEGNPDEAPEGGEALAADQMRREPHGSIGAAAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGVCTTRCETRMFVTNIPYFQEVIVMASTCDACGYRNSELKPGGRIPEKGKKITLVVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLIIKISESLEKVHGFTFGDSLDEHRRSKWLDFKVRLNKLLSLEEAWTLILDDALANSFIAPATDDLKDDNQLTFEEYERSWEQNEELGLNDMDTSSADAAYESTSTTKIE* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02446 501 SMART zpr1 292 452 IPR004457 GO:0008270
Rops2g02446 501 SMART zpr1 36 196 IPR004457 GO:0008270
Rops2g02446 501 Pfam ZPR1 zinc-finger domain 36 195 IPR004457 GO:0008270
Rops2g02446 501 Pfam ZPR1 zinc-finger domain 292 450 IPR004457 GO:0008270
Rops2g02446 501 MobiDBLite consensus disorder prediction 478 501 - -
Rops2g02446 501 Gene3D ZPR1, zinc finger domain 282 337 IPR042452 -
Rops2g02446 501 Gene3D ZPR1, zinc finger domain 28 81 IPR042452 -
Rops2g02446 501 PANTHER ZINC FINGER PROTEIN ZPR1 18 495 IPR040141 -
Rops2g02446 501 FunFam Zinc finger protein ZPR1 26 81 - -
Rops2g02446 501 FunFam zinc finger protein ZPR1 82 223 - -
Rops2g02446 501 NCBIfam ZPR1 zinc finger domain 38 218 IPR004457 GO:0008270
Rops2g02446 501 NCBIfam ZPR1 zinc finger domain 293 484 IPR004457 GO:0008270
Rops2g02446 501 FunFam Zinc finger protein ZPR1 338 480 - -
Rops2g02446 501 FunFam Zinc finger protein ZPR1 283 337 - -
Rops2g02446 501 Gene3D ZPR1, A/B domain 338 480 IPR042451 -
Rops2g02446 501 Gene3D ZPR1, A/B domain 82 223 IPR042451 -
Rops2g02446 501 MobiDBLite consensus disorder prediction 476 501 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02446 6 500 C2H2 Transcription Factor Family AT5G22480 75.301 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02446 K06874 - gmx:100798741 889.026