Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02440 ATGGCGAGATTGAAGGTGCTATCAGCCCTTGATACAGCAAGGACACAATACTACCACTTCAAGGCAATCATAATTGCCGGGATGGGGCTATTCACTGATGCATATGATCTCTTTTCAATCACTCTCATCATCAAAATGATTGGAAGGATATATTACGGTGACCAAAACAAGATTGGTGAAATCAACCCTGTTGTGGCATCAGCCCTTGTGGCCGTTGCACTGTTAGGGACGGCCATAGGTCAACTTGTATTTGGTAGGCTTGGTGACCTCAAAGGACGGCGTCGTGTCTATGGATTCGCCTTGTTGTTGATGCTCACTTGCTCCTTGGCTTCTGGATTCTCCATTTGTAGAACAAGAACATGTGTTCTTCTCTCTCTTGGCTTCTTCAGGTTCTTCTTGGGGCTTGGTATTGGTGGAGACTACCCTTTATCCTCAACTATCATGTCTGAATTTGCAAACAAAAGGACACGAGGGTCTTTCATAGCGGCAGTGTTTTCCATGCAAGGATTCGGCATATTGGCCAGCGCCACCGTCACCATGGTGATCGTCTCCATATTCCGCCGCGCATCTCGGCCGTCATCGCCTATGGATACGCCACAGGAAGCTGACGTTGCATGGAGGTTGATAGTGATGATAGGTTCAATTCCCGCAGCCATGACTTACTACTGGCGTATGATGATGCCCGAAACTGCCAGGTATACAGCTTTAGTGGAACATAATGTGTTGCAAGCAGCAAAGGACATGGAGAAAGTACTAGATGTTTCAATTAGCCAAATTGCTGAAGAAAATCCATTGCCACCATTCCCACATGCATACCCTCTATTTTCCAGAGAATTCTTGCGTCGGCATGGTCGGGATCTTTTCGCTTGTTCCTCTACTTGGTTTCTGTTGGACATTGTGTTCTATACCCAGGTTCTGTTCCAAAGTGACATATACAAACGCTACCTCAAGGACAAAAAAGAAGTTGATGTGTATCAAGAGGCTTTCTATGTTGCAAGGGTCCAAGCCATTATTGCCGTGTGTTCCACAATCCCTGGCTACTTCTTCTCAGTCTACTTCATTGATCGTTTGGGAAGAGTCAAAATCCAAATGATGGGCTTTTTCTTCATGGGGTTGGCTTATTTTGCCATAGGGATTCCCTATTACTCTCACTGGACCACTGAGGAACATAAACATAATAAAGGGTTTATGGTCCTTTATGGCCTTGCTTTTTTCTTTGCCAATTTTGGACCTAACACAACCACTTTCATAGTCCCAGCTGAACTCTTCCCTGCCAGGTTTAGATCAACATGTCATGGCATTTCTGGGGCTGTTGGTAAGGTTGGGGCAATCATTGGATCTGTTGGGTTTCTTTGGGCTTCACATAAGAAGAAGGAGGAAGGATATCCCCATGGAATTGGAATGAAAATCTCCCTCATCTTGCTTGGAGGGGTGTGCATTGTGGGAATGTTTGTCACCTACTTTTTCACCAGGGAAACCATGGGAAGGTCTTTAGAAGAAAATGAGGTTGAGTCTCATCATGCTGAAGATGATAACGATCTTTGA 1545 0.4505 MARLKVLSALDTARTQYYHFKAIIIAGMGLFTDAYDLFSITLIIKMIGRIYYGDQNKIGEINPVVASALVAVALLGTAIGQLVFGRLGDLKGRRRVYGFALLLMLTCSLASGFSICRTRTCVLLSLGFFRFFLGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASATVTMVIVSIFRRASRPSSPMDTPQEADVAWRLIVMIGSIPAAMTYYWRMMMPETARYTALVEHNVLQAAKDMEKVLDVSISQIAEENPLPPFPHAYPLFSREFLRRHGRDLFACSSTWFLLDIVFYTQVLFQSDIYKRYLKDKKEVDVYQEAFYVARVQAIIAVCSTIPGYFFSVYFIDRLGRVKIQMMGFFFMGLAYFAIGIPYYSHWTTEEHKHNKGFMVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAVGKVGAIIGSVGFLWASHKKKEEGYPHGIGMKISLILLGGVCIVGMFVTYFFTRETMGRSLEENEVESHHAEDDNDL* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02440 514 Coils Coil 512 514 - -
Rops2g02440 514 CDD MFS_PhT 23 493 - -
Rops2g02440 514 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 500 - -
Rops2g02440 514 ProSitePatterns Sugar transport proteins signature 2. 132 157 IPR005829 GO:0016020|GO:0022857|GO:0055085
Rops2g02440 514 Gene3D MFS general substrate transporter like domains 18 514 IPR036259 -
Rops2g02440 514 FunFam Inorganic phosphate transporter 1-6 18 514 - -
Rops2g02440 514 Pfam Sugar (and other) transporter 24 502 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops2g02440 514 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 494 IPR020846 GO:0022857
Rops2g02440 514 SUPERFAMILY MFS general substrate transporter 10 502 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02440 Rops-Chr2 39520892 39523614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02440 1 504 Inorganic Solute Cotransporters AT1G76430 63.514 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02440 K08176 - gmx:100797683 836.639