Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02435 ATGTTCTTAGCAAAAGGGGTAAAGGAAATATATGAGGTCAAGGGACTGTCCTTTCATCATGCTATTATGTTTTCTAGTTTAAATGCCTTCAACAAAGACAATCTTGAAACGGGTTTTGAAATGCTATCTAAAATGGTGGTTGATCATGCAAATAACAATCCACTGGCTTTAAAAGTTTTAGGTTCAGTTCTTTATTCCAGAAATGAGCAACAATGGGACTCTGCTCTCAGACACTTCATGAAGGCTCCTAATGTGGAAATTCAGAATAAAGAATATGTTATAAAGCTATTAGAGATTTGTCGCTTCTTTTTAAATATTGGCATAAGTATCCTTCTGGACGAAGTTCAGATGCCAATAAGGTATGTATGCATGCATGATTTGATACAAGAAATGGGCAGGGAAATTGTTCATCAGGAATGCATCAAGACCCTAGAAGGTGTAGTAGATTTTGGGATCCTGAGGAAATCTATGATGTATGTAAAAATAACAGGGTAA 495 0.3576 MFLAKGVKEIYEVKGLSFHHAIMFSSLNAFNKDNLETGFEMLSKMVVDHANNNPLALKVLGSVLYSRNEQQWDSALRHFMKAPNVEIQNKEYVIKLLEICRFFLNIGISILLDEVQMPIRYVCMHDLIQEMGREIVHQECIKTLEGVVDFGILRKSMMYVKITG* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02435 164 Gene3D - 21 101 IPR042197 -
Rops2g02435 164 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 89 IPR027417 -
Rops2g02435 164 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 141 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02435 Rops-Chr2 39373493 39375159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02435 7 143 WRKY Transcription Factor Family AT5G45050 29.167 4.04e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02435 - - ccaj:109805736 174.866