Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02416 ATGGATACCTGGTTCGTCGTGGTAGTCTCTCTCTGCGTCTGTGCTCTCATCAGAGTCATCATCCTCTCCCTTCACTCATCCAAAACCAAGAGCATAACCATTCCTCCAGGCCCTCTCCACGTTCCCATCATCACAAGCATCGTATGGCTCACAAAATCATTCTCCCAACTTGAACCCATTCTCCGAAACCTCCACGCCAAACACGGTCCTATCATCACACTCCGTATTGGCTCTCGTCCCTCCATATTCATAGCCGACAGATCCATCGCCCACAACGCCTTAATCCATAAAGCCTCCCTCTTCTCCGACCGCCCCAAAGCCCTCCCCACCGCCAAACTCACCACCAGCGACCAACATAATATCAGCTCCGCCTTCTATGGTGCCACGTGGCGCGCCCTTCGCCGCAACCTCGCCTCCGAGATGCTTCACCCTTCACGTGTCAAGTCCTTCTCCGAAATACGCAAGTGGGTCCTACACACACTCCTCACCAGCTTGAAATCCGCTTCTGAATCAACCCACACTGTTAAGGTGATGGACCACTTTCAATACGCCATGTTCTGTTTGCTTGTTTTCATGTGTTTCGGCGAAAGAATTGACGACAAAATTGTGAAAGACATCGCGCGTGTCACGCGTGGACTTCTTCTGAGCTTTACCAGATTCAGCATCCTGAATTTCTGGCCCAAAGTAACTAGGATTTTGTTCCGAAAACGTTGGGAGGAGTTCTTGAGGCTTATGCAAGACAGACAAGATGTGCTGGTTCCCCTGATAAGAGCGAGGAAGCAAGCTAAGCAGGGTGAATCTGTTGTTTCTTACGTGGATACTCTATTGGAATTGGAGTTGCCAGAGGAGAAACGAAAGCTGAATGAAGCGGAAATGGTTAGTTTGTGTTCCGAGTTTCTGGACGCGGGGACGGACACAACGTCCACGGCATTGCAGTGGATCATGGCGAATTTGGTGAAGTACCCACACGTGCAACAGAGGGTTGTGGAGGAGATTAGAGAGGTGGTGGGTGGTGATGGTAACAGAAAAGAAGTGAAGGAGGAAGACTTGCAGAAACTGCCGTACCTGAAAGCTCTGATTTTGGAAGGGCTGAGGCGTCACCCACCAGGGCACTTTGTGTTGCCACATGCGGTGACAGATGATGTGGTTTTGAATGGTTATTTGGTGCCTAAAAATGGGACAGTGAATTTCATGGTGGCTGAGATGGGGTTGGACCCTAATGTCTGGGAGGATCCAATGGAGTTCAAGCCTGAGAGGTTCTTGAACAATGGGGAAACTGAGTTTGACATTACAGGGAGTAAAGAGATAAAGATGATGCCGTTTGGAGCAGGGAGGAGGATTTGTCCTGGATACAGCTTAGCCATGCTTCATTTGGAATACTTTGTGGCCAATTTAGTTTGGAATTTTGATTGGAAGGTTCCAGAGGGAGGCTATGTTGATTTGTCAGAAAAACAGGAATTTACAGTGGTCATGGAAAATCCACTGCAGGTTCATATTTCTCCTAGGATCTAG 1512 0.4881 MDTWFVVVVSLCVCALIRVIILSLHSSKTKSITIPPGPLHVPIITSIVWLTKSFSQLEPILRNLHAKHGPIITLRIGSRPSIFIADRSIAHNALIHKASLFSDRPKALPTAKLTTSDQHNISSAFYGATWRALRRNLASEMLHPSRVKSFSEIRKWVLHTLLTSLKSASESTHTVKVMDHFQYAMFCLLVFMCFGERIDDKIVKDIARVTRGLLLSFTRFSILNFWPKVTRILFRKRWEEFLRLMQDRQDVLVPLIRARKQAKQGESVVSYVDTLLELELPEEKRKLNEAEMVSLCSEFLDAGTDTTSTALQWIMANLVKYPHVQQRVVEEIREVVGGDGNRKEVKEEDLQKLPYLKALILEGLRRHPPGHFVLPHAVTDDVVLNGYLVPKNGTVNFMVAEMGLDPNVWEDPMEFKPERFLNNGETEFDITGSKEIKMMPFGAGRRICPGYSLAMLHLEYFVANLVWNFDWKVPEGGYVDLSEKQEFTVVMENPLQVHISPRI* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02416 503 Gene3D Cytochrome P450 27 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 SUPERFAMILY Cytochrome P450 35 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 Pfam Cytochrome P450 35 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Rops2g02416 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02416 503 FunFam Cytochrome P450 family protein 28 503 - -
Rops2g02416 503 CDD CYP77_89 67 496 - -
Rops2g02416 503 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02416 Rops-Chr2 39129677 39131188 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02416 1 502 Cytochrome P450 AT1G64940 55.922 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02416 K24184 - gmx:100805244 752.281