Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02411 ATGGAGACTTGGTTCGTGGTTGTAGTCTCTCTCTGCGTCTGTGCTCTCATCAGAGTCATCATCCTCTCTTTTCTCTCATCCACCGTCAATAAGACCAAGAGCATAACAACCCCTCCAGGCCCTGTTCACATCCCCATCATCACAAGCATCATATGGCTCAGAAAATCATTCTCTCAATTGGAGCCAATTCTCCGAAACCTCCACGCCAAATACGGTCCTATCATCACTCTCCGCTTTGGATCTCGTCCCTCCATTTTCATCGCCGACCGATCAATCGCCCACCACGCACTCATCCAAAACGGTTCCATCTTCTCCGACCGCCCCAAAGCCCTCCCCACTGGCAAACTCCTCTCCAGTGACCAACACAACATCAGCTCCGCCTCCTACGGTGCCACGTGGCGCGCCCTTCGCCGCAACCTTGCCTCCGAGATGCTTCACCCCTCTCGTGTCAAATCTTTCTCCGAAATCCGCAAGTGGGTCCTACACACACTCCTCACCCGCTTGAAATCCGCTTCTGAATCAACCCACTCCGTTAAGGTTATGGACCACTTTCAATACGCCATGTTCTGCTTGCTTGTCTTCATGTGTTTCGGTGAAAGATTTGACGACAAGATAGTCAAAGACATCGCGCGTGTCCAGCGGGGACTTCTTCTGAGTTTAAGAAGATTCAACATCCTGAATTTCTGGCCCAAAGTAACTAAGATTTTGTTCCGGAATCGGTGGGAGGAGTTGTTGAGGCTTATGAAGGAACAAGAAGATGTGCTGGTTTCCCTGATAAGAGCCAGGAAGAAACAAGCCAAACAGGGTGACTCTGACACTGTTATTTCGTATGTGGATACTCTGTTGGAGTTGGAATTGCCAGAGGAGAAACGCAAGCTGAGTGAAAGGGAAATTGTTACCTTATGTTCTGAATTTTTGAACGGGGGTACGGACACAACATCCACGGCGTTACAGTGGATCATGGCGAATTTGGTGAAGTACCCACACGTTCAACAGAGGGTAGTGGAGGAGATTAGGGAGGTGGTGGGTGGCGATGGTAACAGAGAAGAGAAGAAAGAAGTGAAGGAAGAAGACTTGCTGAAATTGCCATATCTGAAAGCTGTGATTTTGGAAGGACTTAGACGTCACCCACCGGGGCACTTTGTGTTGCCACATGCTGTGACAGAGGATGTTGTTTTGAATGGTTACTTGGTACCTAAAAATGGGACAGTGAATTTCATGGTGGCTGAGATGGGGTGGGACCCTCAGGTGTGGAAGGATCCCATGGCATTCAAGCCGGAGAGGTTCTTGAACAATGAGGAGTTTGACATTACTGGGAGTAAAGAGATAAAGATGATGCCTTTTGGAGCAGGGAGGAGGATTTGTCCTGGCTTTAATTTAGCCTTGCTTCATTTGGAATACTTTGTTGCCAATTTGGTTTGGAACTTTGACTGGAAGGTTCCAGAAGGAAGCCATGTTGATTTGTCAGAGAAACAGGAATTCACTATGGTCATGAAAAATCCATTGCAGGTTCATATTTCTCCTAGGATCTAG 1533 0.4788 METWFVVVVSLCVCALIRVIILSFLSSTVNKTKSITTPPGPVHIPIITSIIWLRKSFSQLEPILRNLHAKYGPIITLRFGSRPSIFIADRSIAHHALIQNGSIFSDRPKALPTGKLLSSDQHNISSASYGATWRALRRNLASEMLHPSRVKSFSEIRKWVLHTLLTRLKSASESTHSVKVMDHFQYAMFCLLVFMCFGERFDDKIVKDIARVQRGLLLSLRRFNILNFWPKVTKILFRNRWEELLRLMKEQEDVLVSLIRARKKQAKQGDSDTVISYVDTLLELELPEEKRKLSEREIVTLCSEFLNGGTDTTSTALQWIMANLVKYPHVQQRVVEEIREVVGGDGNREEKKEVKEEDLLKLPYLKAVILEGLRRHPPGHFVLPHAVTEDVVLNGYLVPKNGTVNFMVAEMGWDPQVWKDPMAFKPERFLNNEEFDITGSKEIKMMPFGAGRRICPGFNLALLHLEYFVANLVWNFDWKVPEGSHVDLSEKQEFTMVMKNPLQVHISPRI* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02411 510 Pfam Cytochrome P450 38 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 Gene3D Cytochrome P450 30 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 502 - -
Rops2g02411 510 SUPERFAMILY Cytochrome P450 38 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 FunFam Cytochrome P450 family protein 31 510 - -
Rops2g02411 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Rops2g02411 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 CDD CYP77_89 70 503 - -
Rops2g02411 510 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02411 510 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02411 Rops-Chr2 39042989 39045123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02411 1 509 Cytochrome P450 AT1G64940 56.647 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02411 K24184 - gmx:100788826 776.933