Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02408 ATGAAGATGCAAGAAAGCAAGCAGAAGAAGAACGCTCTGTGGCGAGACATAGAAGCCAGGATGGAACAACATGGGAGCATGCCTTTCAACCCATTCCCTATGTTTCGTTTGAAAAGACTATTGTCTCTGGTTGCACCGCATTTTTATACCAAAGAAGAGATAGCTCAGTTAGAGGAAATCGAAAAATGGTGCCACCAAGAATCACCTTCAAAGAATGCAATGGAAGAGACAAAGAATGGCAAGAAAAGATGTCACTCTCCAACTCATGAAGGCATGTTAGAAGAGGGAAGAATCAAACCAATCAAGAAACCAAGATTGGACCAGTCAGCAAAAACAAAGGCCAAACCAATCAAGAAACCAAGACCGAGCAAGCCAATACAGCCAAATCCACGTCCAACATTCCAAGAATTGCCCATTCAATTCCGGAACCGAATCATAGAGTTGAATGGTAGCGATGTCCAGTTTGTGATGCTCAAGAAGTTGTTTGAAACTGATGTTAAACCAAACAACAATCGTCTTTCAATGCCACTAGGTGAAATCACGTGTGATTTCCTCACTGAAAGAGAGAAAGCAACATTAGTTGAAGAGGAAGACGGTCGACCTGTTGGTTTGGAAGTGATTGTGTTGGACCCTTGTCTTAGAGAGTTCACTCTGTCCTTGAAGAAGTGGGCCATGCCGACATCCAGTACTTACAATCTTGTTAAAAACTGGAAACTTATTTTATTGCAAAATAATTTGCAAGTGGAGCAACAATTCTACATTTGGTCTTTTAGGGTCAACGGCAAGCTCTACTTTATCTTGGAGAAGAAGGATTTCTAG 819 0.4151 MKMQESKQKKNALWRDIEARMEQHGSMPFNPFPMFRLKRLLSLVAPHFYTKEEIAQLEEIEKWCHQESPSKNAMEETKNGKKRCHSPTHEGMLEEGRIKPIKKPRLDQSAKTKAKPIKKPRPSKPIQPNPRPTFQELPIQFRNRIIELNGSDVQFVMLKKLFETDVKPNNNRLSMPLGEITCDFLTEREKATLVEEEDGRPVGLEVIVLDPCLREFTLSLKKWAMPTSSTYNLVKNWKLILLQNNLQVEQQFYIWSFRVNGKLYFILEKKDF* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02408 272 MobiDBLite consensus disorder prediction 69 90 - -
Rops2g02408 272 Gene3D - 146 271 IPR015300 -
Rops2g02408 272 SUPERFAMILY DNA-binding pseudobarrel domain 157 269 IPR015300 -
Rops2g02408 272 MobiDBLite consensus disorder prediction 105 133 - -
Rops2g02408 272 Pfam B3 domain-containing protein At2g31720-like 147 240 IPR005508 GO:0003677
Rops2g02408 272 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 56 270 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02408 Rops-Chr2 38972928 38973746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02408 123 269 B3 DNA Binding Superfamily AT1G05930 24.667 5.15e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02408 - - cam:101490092 209.534