Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02403 ATGGAAAACGTTCTGGGTCTCCTCAAACTTCGTATCAAAAGAGGCACTAATCTCATACCTCGTGACACTCGTACCAGTGATCCATATGTTGTGGTCACCATGGACGAACAGAAACTGAAAACTGGTGTTGTGAAAGATAACTGTCATCCTGAGTGGAATGAAGAATTGACACTTTGTGTTAGGGATGTTAACACTCCCATACATCTGAGAGTTTGTGACAAAGACACTTTCACTGTGGATGACAAAATGGGGGATGCAGAAATAGACATAAAACCATATCTTCATTGTGTGAAGATGGACTTGAAAGATCTCCCAGATGGCCATGTTGTCAAGAAGGTTCAACCAAATAGGACCAATTGCCTTGCTGAAGAGAGTAGCTGCATGTGTAGAAATGGGAAAATCATCCAAGAGATGACTCTAAGATTGAGAAATGTTAAGTCTGGTGAAGTAACAGTGGAAATTGAATGGGTTAGTATTCCAGATTCCAAGGGCTTATCAGAGGTAGAGTTTTAG 513 0.4094 MENVLGLLKLRIKRGTNLIPRDTRTSDPYVVVTMDEQKLKTGVVKDNCHPEWNEELTLCVRDVNTPIHLRVCDKDTFTVDDKMGDAEIDIKPYLHCVKMDLKDLPDGHVVKKVQPNRTNCLAEESSCMCRNGKIIQEMTLRLRNVKSGEVTVEIEWVSIPDSKGLSEVEF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02403 170 Pfam C2 domain 7 92 IPR000008 -
Rops2g02403 170 Gene3D C2 domain 2 167 IPR035892 -
Rops2g02403 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Rops2g02403 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Rops2g02403 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
Rops2g02403 170 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02403 Rops-Chr2 38793945 38795744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02403 38 166 C2H2 Transcription Factor Family AT1G70790 57.252 2.34e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02403 - - gmx:100781585 287.73