Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02394 ATGGAGTCTAATGCTTGCAACATGCATTCACATTGTGTAGATATGACCATGGAAATACACCAAGTTGTTCCACCACCCCACAAGAGCACCTTACAAAAGCTCAAAGCTAGGCTCAAGGAAACTTTTTTCCCTGATGATCCTCTTCGCCAATTCAAGGGACAACCACTTAAGAAAAAACTTATCCTTGGAGCTCAATATTTGTTCCCTATTCTTCAATGGGGTCCTAATTATAGCCTCAAACTTTTTAAATCTGACCTTGTTGCTGGCCTCACTATTGCTAGCTTGGCCATCCCACAGGGAATAAGTTATGCTAAGCTTGCAAGTCTTCCTCCAATTGTGGGACTATATTCTAGTTTTGTTCCCCCACTTGTTTATGCTGTTCTTGGAAGCTCAAGGGACTTAGCGGTAGGACCTGTTTCTATTGCTTCTCTTGTGTTGGGATCCATGTTGAGGCAAGAAGTGTCTCCCTCAGCAGACCCAGTTCTGTTTATTGAGCTTGCTTTTACTTCAACATTCTTTGCTGGTCTCTTTCAAGCTTCTCTTGGAGTCCTAAGGTTAGGATTCATCATTGATTTTCTATCTAAGGCTACCCTTGTTGGGTTCATGGCTGGAGCTGCAATAATTGTCTCTCTGCAACAGCTCAAGAGCCTCCTCGGAATCACACATTTCACTAAACAGATGGGCCTGATTCCTGTTATGAGTTCTGTTTTTCACAATATTCATGAGTGGTCATGGCAAACAATATTGATGGGAATTTGCTTCTTGGTGCTACTACTACTAGCAAGACACGTTAGCATAAGGAAACCAAAGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTCATCATCTCTACTCTTCTGGTTTTTGGAATTAAGGCTCAAAATCATGGCATCAGTGTAATTGGAAAATTGCAAGAAGGATTAAATCCTCCTTCATGGAACATGTTGCGCTTTCATGGAAGTCATCTTGGCCTAGTCGTGAAAACTGGACTTATCACTGGCATTTTGTCCCTCACTGAAGGTATTGCAGTAGGAAGGACGTTTGCAGCTCTCAGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATTGGGTTCATGAATGTGGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGATCAGCTGTTAACAATAACGCAGGTGCAAAAACAGCAGTTTCAAATGTAGTAATGTCTGTGACAGTGATGGTGACACTCCTGTTTCTTATGCCTTTGTTCCAATACACACCTAATGTTGTATTGGGTGCAATCATAGTCACAGCAGTTATTGGCCTCATTGATATCCCTGCTGCTTGTCACATTTGGAGGGTAGACAAATTCGATTTCCTTGTGATGTTGACTGCTTTCTTGGGTGTTGTTTTCATCTCAGTCCAGGAAGGCCTTGCTCTTGCAGTTGGGTTATCAACTTTTAAGATACTCCTGCAAATTACAAGGCCTAAAACAGTAATGTTGGGGAAGATACCTGGGACAGACATATATAGAAATCTTCATCAATATAAAGAAGCTGTAAGACTACCAGGTTTTCTTATTTTGAGCATTGAGGCTCCCATCAATTTTGCTAACATCACATATCTCAACGAGAGGACATTACGATGGATTGAAGAAGAAGAAGATAACATCAAGGAACACTCAAGCCTTCGATTTTTAATCCTGGAAATGTCAGCTGTGAGCGCCATTGACACAAGTGGAATCTCACTTTTCAAGGAGTTGAAAGCAACATTAGAAAAGAAGGGTGTTGAGCTTGTGTTGGTGAATCCTCTAGCTGAGGTCATAGAAAAGCTGAAAAAAGCAGATGAAGCTAATGATTTCATACGAGCAGATAACCTTTTCTTGACAGTTGGAGAGGCTGTAGCTTCACTTTCATCGGCAATGAAGGGCCAATCAACCACAACAGAAGAAGCACATACTATTGTACCACATTATTGA 1971 0.4165 MESNACNMHSHCVDMTMEIHQVVPPPHKSTLQKLKARLKETFFPDDPLRQFKGQPLKKKLILGAQYLFPILQWGPNYSLKLFKSDLVAGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPSADPVLFIELAFTSTFFAGLFQASLGVLRLGFIIDFLSKATLVGFMAGAAIIVSLQQLKSLLGITHFTKQMGLIPVMSSVFHNIHEWSWQTILMGICFLVLLLLARHVSIRKPKLFWVSAGAPLVSVIISTLLVFGIKAQNHGISVIGKLQEGLNPPSWNMLRFHGSHLGLVVKTGLITGILSLTEGIAVGRTFAALRNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAACHIWRVDKFDFLVMLTAFLGVVFISVQEGLALAVGLSTFKILLQITRPKTVMLGKIPGTDIYRNLHQYKEAVRLPGFLILSIEAPINFANITYLNERTLRWIEEEEDNIKEHSSLRFLILEMSAVSAIDTSGISLFKELKATLEKKGVELVLVNPLAEVIEKLKKADEANDFIRADNLFLTVGEAVASLSSAMKGQSTTTEEAHTIVPHY* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02394 656 NCBIfam sulfate permease 69 631 IPR001902 GO:0016020|GO:0055085
Rops2g02394 656 ProSiteProfiles STAS domain profile. 513 635 IPR002645 -
Rops2g02394 656 Gene3D STAS domain 493 637 IPR036513 -
Rops2g02394 656 Coils Coil 602 622 - -
Rops2g02394 656 FunFam Sulfate transporter 31 493 638 - -
Rops2g02394 656 CDD STAS_SulP_like_sulfate_transporter 514 628 - -
Rops2g02394 656 PANTHER SULFATE TRANSPORTER 29 637 IPR001902 GO:0016020|GO:0055085
Rops2g02394 656 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Rops2g02394 656 Pfam STAS domain 514 631 IPR002645 -
Rops2g02394 656 SUPERFAMILY SpoIIaa-like 519 635 IPR036513 -
Rops2g02394 656 Pfam Sulfate permease family 82 462 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02394 Rops-Chr2 38629937 38636671 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02394 14 642 Inorganic Solute Cotransporters AT3G15990 66.561 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02394 K17471 - gmx:100787284 1163.67