Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02392 ATGATGGTTACCATCGTGGTAGCTAATTTGGTGACTAAACAATGTTTCTTTGCGATCGATGATTCAGAAGAAGACAACAGCGAAGATAAGCAATCAAGGAGTGATCTGCAGGGTGTTGATCAATGGGGTAGGCCAAAGAGTACGAGTGGTAGTGGTAGTGGTAGTGGTAGTGGTAGTGGCATGCATTCCAATGTGGTAGAAATAACCATGGAAGTGCACCAAGTCAGAAGGGAATCAGTTATGCTAAGCTTGCAAGTCTTCCTCCAATTGTGGGATTGTATTCTAGTTTTGTTCCCCCCACTAGTTTACGTCGTTCTTGGAAGCTCAAAGGATCTTGCAGTGGGACCTGGTTCTATTGCATCTCTTGTTTTAGGATCCATGCTTACACCGGAAGTTTCTCACTTGACACAACCTGATCTATATCTTAAGCTAACTTTAACTTCAACATTCTTTGCTGGTCTCTTTCAAGCTTCTCTTGGAATTCTAAGGCTAGGATTTATCATTGATTTTCTATCTAAGGCGATCCTGAATCCTGATTGGGTTCATGGCTGGAGCTGCTTGGTCATGGCAAACAATCCTGTTGGGGCTCTCCTTCTTGGTGGTACTACTGCTAGCGAGACACGTTAGCATGAGGAAGCCAAAAATTTTCTGGGTCTCAGCTGGAGCTCCTCTTTTGTCTGTGATAGTCTCTACTATCCTGGTTTTTGTAATCAAGGGTCATCATCATGGCATCAGTATAATTGGAAAATTGCAACAAGGAATAAATCATCCTTCAGTGAATATGTTACTCTTTCACGGAACTCATCTAGGTTTGGTCATGAAAACTGGGTTTATCACTGGCATTTTATCCCTCACTGAATTGCAGTGGGAAGGGCATTTGCAGCTATCAGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATTGGGCTCATGAATGTGGTTGGCTCCACCACATCCTGCTATGTTACAACAGGATCTTTCTCTCGATCAGCTGTCAATCATAATGCAGGTGCAAAAACAGCAATGTCAAATGTAGTAATGTCTGTGACAGTCATGGTGACACTTCTTTTTCTTATGCCTTTATTTCGATACACGCCTAATGTTGTATTGGGTGCAATCATAATAACAGCAGTAATTTGCCTCATTGATATCTCTGCTGCTTGTCACATTTGGAAGATAGACAAATTCGATTTCATTGTGATGTTGACTGCATTCTTTGGTGTTATTTTTATCTCTGTCCAGTATGGCCTTGCTCTTGCACTTGTGTTGGTGAATCCTCTAGCTGAGGTCATGGAGAAGCTGAAAAGAGCAGATGAAGCTAATGATTTCATTCAAGCAGATTTCCTTTTCTTGTCAGTTGGAGAGGCTGTAGTTTCACTTTCATCAGCAATGAAGGGCCCATCCTCAAACATGGAAGAAGAGGCACAAGAAATTGTGACTGAGTGCTAG 1455 0.4192 MMVTIVVANLVTKQCFFAIDDSEEDNSEDKQSRSDLQGVDQWGRPKSTSGSGSGSGSGSGMHSNVVEITMEVHQVRRESVMLSLQVFLQLWDCILVLFPPLVYVVLGSSKDLAVGPGSIASLVLGSMLTPEVSHLTQPDLYLKLTLTSTFFAGLFQASLGILRLGFIIDFLSKAILNPDWVHGWSCLVMANNPVGALLLGGTTASETR*HEEAKNFLGLSWSSSFVCDSLYYPGFCNQGSSSWHQYNWKIATRNKSSFSEYVTLSRNSSRFGHENWVYHWHFIPH*IAVGRAFAAIRNYKVDGNKEMMAIGLMNVVGSTTSCYVTTGSFSRSAVNHNAGAKTAMSNVVMSVTVMVTLLFLMPLFRYTPNVVLGAIIITAVICLIDISAACHIWKIDKFDFIVMLTAFFGVIFISVQYGLALALVLVNPLAEVMEKLKRADEANDFIQADFLFLSVGEAVVSLSSAMKGPSSNMEEEAQEIVTEC* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02392 482 PANTHER SULFATE TRANSPORTER 97 176 IPR001902 GO:0016020|GO:0055085
Rops2g02392 482 MobiDBLite consensus disorder prediction 36 60 - -
Rops2g02392 482 Coils Coil 427 447 - -
Rops2g02392 482 MobiDBLite consensus disorder prediction 24 60 - -
Rops2g02392 482 Pfam Sulfate permease family 86 177 IPR011547 GO:0016020
Rops2g02392 482 Pfam Sulfate permease family 281 403 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02392 Rops-Chr2 38586676 38605192 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02392 419 468 Inorganic Solute Cotransporters AT1G23090 62.000 1.48e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02392 K17471 - ath:AT1G23090 210.305