Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02390 ATGGATGATGAAGTTGTTCAACGAGTGTTCCATGAAGGAGGACGCGATTACTTTCAACAACAACCTTCAACTTCTACGTCTTCCTCTTCCATCCTTCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGATATTATTTATTGGTAAAATCTATCCAAGAACTTAGAGAGAAAAAGGACGGTGTTGTTACAGTTGGCATTGGCGGTCCGAGTGGTTCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACTGTTATATCAATGGAGAATTATTGTGATGGAGTTGACGAAGGGAATGATCTGGATTCTATAGATTTTGATACCCTGATCAAGAATCTTGAGGATTTGACAAAAGGCGAGGATACATTAATTCCAGAGTTTGACTATCAGAAAAAGAGACGTGTTGGCTATAAAACAATAAAGAGTGCTTCATCTGGGGTGGTAATAGTTGATGGTACATATGCATTGCATGCAAAACTGCGGTCGTTACTGGATATTCGAGTCGCTGTGGTTGGTGGTGTTCATTTTAGCCTGCTTTCTAAAGTTCGCTATGACATTGGAGATTCTTGTTCGCTGGATTACCTTATAGATAGCATTTTCCCATTATTCAGGAAGCACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAACAACAGTTTTGTCTCATCATTTAGAGAGGCAATCTACAAGGTTAAATGCAGAAGCAAGTCTTCACATGTACATTCAGGTTCTTCCTTTCAAGGAAATGAAGCCCAAACAGATAATTTTATTGAAATGTACCTTAGACCGCCTTCAGCTAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAAATATTATTTATCACTTGGTGACCAGAGGATTGTTGACAAAAATTTCATTATCAGGCCTAAAGCTGAGTTTGAGGTTGGACGAATGACATTGGGTGGATTGCTGGCTCTTGGGTACATTGTTGTGGTTAGTTATAAACGTGCATCGGTGACTGTCAATTATGGCAAGGTTTCAATGTCTTTTGAAACCATTGATGCTCTTGGTGAGACATTCATGGTGATGAGAGGAACTGATAGGAAGACTGTTGGAACAGAAGCATTGAGGATGGGTATCAATGGACCTTGGATTACTAAATCATATCTGGAAATGATTCTTGAGAGAAAAGGTGTACCCCGTCTTAGTACACCACCGCTTGTGTCTAATACAACTGTAGCTGGCAGTCCAGAGACAGCAATCGTTGCACCAAAGCCAATTCGTGTTACTCCTAACCTAGTTACTGGGCTTGAGGATTTATCTCAGCCATGGACTCGATCCCCAACAAAATCTAAAATAGAACCTGTTGTGGCTACATGGCATTTCATATCTTCTGATCCCTCCCAGCCTGACAACTCAGTCCTAGATCCTTCATCTTTCAGGGACACCATTAGGCTTGCTCCAATGCCTGATTCATATGATTTGGATAGGGGATTGCTTCTGGCAGTTCAAGCAATACAAGCTTTGTTGGAGAATAAAGGTGTTCCAGTCATAGTCGGAATTGGAGGTCCAAGTGGGTCTGGGAAGACTAGTTTGGCTCATAAAATGGCAAACATCATTGGTTGTGAAGTAGTTTCCTTGGAAAGCTATTATAAAAAAGTAAAGGATTTTAAATATGATGACTTCAGCTCACTTGATTTATCTTTACTATCAAAGAATATTGATGACATAAGAAATGGTCGAAGAACAAAAGTACCCATATTTGACTTGGAAAGTGGGGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGTGATTATATTTGAAGGTGTCTATGCTTTGCATCCTGATATTCGAATATCGCTTGACTTGTGGATTGCTGTTGTAGGAGGCGTTCATTCACATCTGATTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGATGTTTTATTTCCCAAAATGAGATCATGATGACAGTGTTTCCTTTGTTCCAGCAGCTTATTGAACCTCATCTTGTCCATGCACATCTCAAAATTCGAAATGACTTTGACCCTGTGCTTTCTCCCGAGAGTTCATTGTTTGTATTAAAGAGTAACAAAAAAGTAGCTTATCAAGATATTCTAGCAATTCTTGATCCAGCAAAATTTTGCAGTTCAGTGCAGAAATTTATTGATATTTATATAAGGCTTCCTGGGATCCCTTCTAATGGGCAGTTGACAGATAGTGATTGTATTCGAGTCAGAATCTGTGAAGGCAGATTTGCATTGCTAATACGTGAGCCTATCAGAGAAGGAAACTTCATTATTCAGCCTAAAGTGGATTTTGATATTAGCATTAGTACGGTTGCTGGTCTTCTTAACCTTGGGTATCAAGCTGTTGCTTATATTGAAGCGTCTGCATTCATCTATCAGGATGGAAAGATTCTAATTGAGGTTGATCATCTACAAGATGTCCCTGGCCCATACATCCAGATAAAGGGGGTTAATAAAGATGCTGTGGCAACAGCAGGTTCAAAGCTTAAATTGGATGGTTCATATACTACTAAGAGTTATCTTGAAATAGTTCTGGAAAGACTACCAGCAATAGAGAGAACTTCTGGGGGGATTCACTCTCAACAATCAGCAAGGCTGCTAGAGATTGTTGAATTTATTCAATCTCAGGGATGTAGCTCTTCTTCAGAATCCTCACCAAGTAGGATAGTGTCTCCAATTGAAGGCATTGTTGAGGAGATGCAATCAAGGATTAGAAGGCTTGAAAGGTGGCTTGCAATAAATACGGTTCTATGGACATTTCTGATGTCTGCCCTTGTTGGTTATTCACTATATCAAAGGAGGCGTCAATGA 2850 0.3993 MDDEVVQRVFHEGGRDYFQQQPSTSTSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGVVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYCDGVDEGNDLDSIDFDTLIKNLEDLTKGEDTLIPEFDYQKKRRVGYKTIKSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSKSSHVHSGSSFQGNEAQTDNFIEMYLRPPSASEEARINDWIKVRQSGIKYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASVTVNYGKVSMSFETIDALGETFMVMRGTDRKTVGTEALRMGINGPWITKSYLEMILERKGVPRLSTPPLVSNTTVAGSPETAIVAPKPIRVTPNLVTGLEDLSQPWTRSPTKSKIEPVVATWHFISSDPSQPDNSVLDPSSFRDTIRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKKVKDFKYDDFSSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGFKELEVSEVIIFEGVYALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPLFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILAILDPAKFCSSVQKFIDIYIRLPGIPSNGQLTDSDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVATAGSKLKLDGSYTTKSYLEIVLERLPAIERTSGGIHSQQSARLLEIVEFIQSQGCSSSSESSPSRIVSPIEGIVEEMQSRIRRLERWLAINTVLWTFLMSALVGYSLYQRRRQ* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02390 949 Gene3D - 698 861 - -
Rops2g02390 949 Gene3D - 63 245 IPR027417 -
Rops2g02390 949 Pfam Phosphoribulokinase / Uridine kinase family 519 681 IPR006083 GO:0005524|GO:0016301
Rops2g02390 949 Pfam Phosphoribulokinase / Uridine kinase family 107 223 IPR006083 GO:0005524|GO:0016301
Rops2g02390 949 SUPERFAMILY CYTH-like phosphatases 722 856 IPR033469 -
Rops2g02390 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 684 IPR027417 -
Rops2g02390 949 CDD UMPK_like 519 684 - -
Rops2g02390 949 SMART AAA_5 516 657 IPR003593 GO:0016887
Rops2g02390 949 SMART AAA_5 61 211 IPR003593 GO:0016887
Rops2g02390 949 Gene3D - 516 690 IPR027417 -
Rops2g02390 949 CDD UMPK_like 64 226 - -
Rops2g02390 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 176 IPR027417 -
Rops2g02390 949 PANTHER URIDINE KINASE 10 255 - -
Rops2g02390 949 PRINTS Uridine kinase signature 517 534 - -
Rops2g02390 949 PRINTS Uridine kinase signature 635 645 - -
Rops2g02390 949 PRINTS Uridine kinase signature 544 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02390 Rops-Chr2 38550311 38571447 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02390 512 672 PRT Gene Family AT1G55810 25.989 1.82e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02390 - - gmx:100778905 1675.6