Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02388 ATGGAGATGGAGTCAACCACCAAGAGTCACAAGTCCCTCTTCATCAGGAACCTTGTCTTATTCTGCTCATGCTTCTGCTTCGTTGGAAACCCTCTCTTTGTCTCAGCTGCATCGAAGTCAACCCATGAATTCCCCAAAGAAGCCCTTCCCACCAAATCTGGTTACCTCCCAGTTAGCCCCACTTCCACTTCCTCCATTTTCTACACTTTCTATGAAGCCCAGAACTCCACTTCACCTCTCTCCCAAACCCCATTTCTCATTTGGCTCAATGGTGGCCCTGGCTGCTCCTCCATGATTGGCAACTTCTATGAACTTGGACCCTGGCGTGTCACCAATTCACTTACCCTTCAACCCAACCCTGGTGCTTGGAATAGAATTTTTGGCCTTCTTTTTCTTGATAGTCCCATTGGAACTGGTTTTAGTGTGGCCTCAACGCCAGAAGAAATCCCAACTGATCAAAACGGTGTTGCCAAGCACCTTTTTGCTGCTATAACTAGGTTTGTTCAACTTGATCCTGTTTTCAAGCATCGTCCTATTTATATTACTGGTGAAAGCTATGCTGGGAAGTATGTTCCTGCAATTGGGTATTACATACTGGAGAAAAATGCTGAGTTGAAGGTCTCTGAGAGAGTGAATTTGGCTGGTGTGGCAATTGGAGATGGGTTGACAGACCCTGTAACACAAGTGGCTACTCATGCTGCCAACGCTTACTATGTTGGATTGATCAATGAGCGGCAAAAGAATGAGTTGGAGAAAGCCCAATTGGAAGCTGTTAGATTAGTCCTGTTAGGGAATTGGAGTGAAGCAACTGATGCGAGAAACAAAGTCTTGAATGTGTTGAAGAACATGACAGGGTTGGCTACTTCGTATGACTATACAAGGAAAGTTCCTTATCAAGATGATTTGGTTGCTAAGTTCTTGAACTTTGCTGAGGTGAAGAAGGCCTTGGGGGTGAATGAATCCTTTGTGTATGAGCTATGCAGTGATATTGTTGGGGCTGCATTACATGCTGATGTGATGAAAAGTGTGAAATATATGGTAGAGCACTTGGTGAGGAGGAGCAGGGTGTTGTTGTATCAAGGTCAGTATGATTTGAGGGATGGTGTGGTGCAAACTGAGGTTTGGGTGAAGACAGTGAAATGGGAAGGGATTGAGGAGTTTCTGAATGCTGAAAGGAAGATTTGGAAGGTAAATGGAGAGCTTGCTGGGTATGTACAAAACTGGAAGTCACTCACCAATGTTGTGGTTTTGGGAGCTGGGCATCTTTTGCCTACTGACCAGGCTGTGAATTCTCAAGCTATGATAGAAGACTGGGTTTTGGAAAAGGGTTTGTTTACAAGTCTGCAGCAGGAAAATGTGTCAAGAGATTCTGTATCTGATGTGTAA 1386 0.4459 MEMESTTKSHKSLFIRNLVLFCSCFCFVGNPLFVSAASKSTHEFPKEALPTKSGYLPVSPTSTSSIFYTFYEAQNSTSPLSQTPFLIWLNGGPGCSSMIGNFYELGPWRVTNSLTLQPNPGAWNRIFGLLFLDSPIGTGFSVASTPEEIPTDQNGVAKHLFAAITRFVQLDPVFKHRPIYITGESYAGKYVPAIGYYILEKNAELKVSERVNLAGVAIGDGLTDPVTQVATHAANAYYVGLINERQKNELEKAQLEAVRLVLLGNWSEATDARNKVLNVLKNMTGLATSYDYTRKVPYQDDLVAKFLNFAEVKKALGVNESFVYELCSDIVGAALHADVMKSVKYMVEHLVRRSRVLLYQGQYDLRDGVVQTEVWVKTVKWEGIEEFLNAERKIWKVNGELAGYVQNWKSLTNVVVLGAGHLLPTDQAVNSQAMIEDWVLEKGLFTSLQQENVSRDSVSDV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02388 461 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Rops2g02388 461 Gene3D alpha/beta hydrolase 34 451 IPR029058 -
Rops2g02388 461 SUPERFAMILY alpha/beta-Hydrolases 50 440 IPR029058 -
Rops2g02388 461 Pfam Serine carboxypeptidase 49 439 IPR001563 GO:0004185|GO:0006508
Rops2g02388 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 52 427 IPR001563 GO:0004185|GO:0006508
Rops2g02388 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Rops2g02388 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Rops2g02388 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Rops2g02388 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Rops2g02388 461 Coils Coil 243 263 - -
Rops2g02388 461 FunFam Carboxypeptidase 35 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02388 Rops-Chr2 38515499 38516884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02388 303 439 Calmodulin-binding Proteins AT2G22960 22.302 1.10e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02388 K09645 - gmx:102663282 751.125