Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02378 ATGCAAAGGATGATGGTGGATGCTTATAGAGAAGGGTCTTCTTCATCATCTTACTATAGCATTCTTGGTGTTAGTTCAGATTCTTCCATAGAAGAGATAAGACGAGCTTACAGGAAACTAGCTATGCAATGGCATCCAGATAGGTGGACAAGAACCCCTTCTTTACTTGGTGAAGCCAAGCACAAATTTCAGCAAATTCAAGAAGCCTATTCAGTTCTATCTGACCCCAACAAGAGAACGATGTATGATGCAGGCTTATATGATCCTCAAGAGGAAGAGGATGAGGGCTTTTCTGATTTTGTGCAAGAAATGGTGTCCCTTATGGCTCAAGTGAGGAGAGAGGAAAAGGTTTATGGTTTGGAGGAGTTGCAGGCCATGTTCATGGAAATGGCTCAAGGATTTGAGTCTCCTTCAATATATGGTGGAGTACCTTCAGTGATTGATGAATCCCGGTGTATGGAGAATAAGGGGTCACATTTTCAAGATTTTCATGGAAGTTTCACAGATAGTGAATGTAGGGAGAAGAGGAGGAGGGGAAATTGTTGTCATTTTGTGTGTGGAAATTTTGCACAAATGGATTTTCATGCTTGGAGTGATTGA 600 0.415 MQRMMVDAYREGSSSSSYYSILGVSSDSSIEEIRRAYRKLAMQWHPDRWTRTPSLLGEAKHKFQQIQEAYSVLSDPNKRTMYDAGLYDPQEEEDEGFSDFVQEMVSLMAQVRREEKVYGLEELQAMFMEMAQGFESPSIYGGVPSVIDESRCMENKGSHFQDFHGSFTDSECREKRRRGNCCHFVCGNFAQMDFHAWSD* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02378 199 Gene3D DnaJ domain 6 106 IPR036869 -
Rops2g02378 199 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Rops2g02378 199 PANTHER PUTATIVE, EXPRESSED-RELATED 12 148 - -
Rops2g02378 199 ProSiteProfiles dnaJ domain profile. 17 86 IPR001623 -
Rops2g02378 199 SUPERFAMILY Chaperone J-domain 15 89 IPR036869 -
Rops2g02378 199 CDD DnaJ 21 75 IPR001623 -
Rops2g02378 199 Pfam DnaJ domain 18 83 IPR001623 -
Rops2g02378 199 PRINTS DnaJ domain signature 19 37 IPR001623 -
Rops2g02378 199 PRINTS DnaJ domain signature 58 78 IPR001623 -
Rops2g02378 199 PRINTS DnaJ domain signature 37 52 IPR001623 -
Rops2g02378 199 SMART dnaj_3 16 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02378 Rops-Chr2 38175302 38177098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02378 18 84 C2H2 Transcription Factor Family AT1G74250 47.059 1.90e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02378 - - lja:Lj0g3v0084989.1 238.424