Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02367 ATGAGAACCAAGTCCCTTTTCTTCTCATTCTTAGCTCTCTCTTTCTTGCTTCACTTTCAATGTTTAGTTATTGCCCAAGAACTAGCGAGTTCAGAAAGGGAAGCACTTGAGCAAATAGAACCAGAAAGGAAAACACTTGAAATTATCATAGGTGGTGGTGGAGGTGGTCCTGCTCCTTCCCCTGCTTATTGCCCACCTCCACCTCCACCACCATGTCCACCACCACCACTGAGCCGGTTAGAGAAAGCACGCCGTGTGCTTCTGAACTTCAAGACCCTTATTTATGACCCAAATGGGTACACTAATAACTGGAACCAACGCACCACCAACACATGTGACTTCAATGGGATTCGATGTGCCATTTATCCAAAATCAAAGGACCTAGCAGTTGCTGGTTTGGACTTCAACCAAGCAAAGTTGTGTGGTAAAAACGGTAAGAGTTTGTCCCTCACAGGTATCTTGGATCGTATACAAGATTTAACATTCTTCCATGTAAACTCCAACTTCTTCTCTGGTTCAGTACCAAAAGAAATTACCAAGTACCCTTTTTTCTTCGAATTGGACCTTAGTAACAACAAACTTGATGGGGAGTTTCCAAAGGATGTTCTTCAATCAAAGAAACTAGTGTTCTTGGACCTAAGGTTCAATAACATCTACGGTTCAATTCCTCCACAGCTGTTTAATCTCGATCTTGATGTGATTTTCATCAACAACAACAAGTTCAGTCAATATCTCCCTGATAATTTTGGGTCAACCCCTGCAAGGTACCTCACATTCGCCAACAACCAACTCACGGGTCCAATCCCAAGGAGTATTGGCAACGCTTCTAAGACCCTTACTGAAGTGCTTTTCTTAGGGAACAAATTTGATGGGTGCTTACCTTATGAAATTGGGTATCTCAAAAAGGCTACGGTTTTTGATGTGAGTAATAACTCTTTAACTGGTCCAATTCCACTCTCATTTGGCTGCTTGGAGAAGATTAGGTACCTCAATTTGGCAGACAACAAGTTCTATGGTGTTATTCCTGAGAATGTGTGTCTGCTTCCAGGGATACGCAATGATGGGAACCTGTCTTTGGCTAATAACTATTTCACTGGGCTTGGACCAGCATGTTGGAAGCTGTTAAAGTCTAAGGTGTTGAACGTGGCCAATAATTGCATACCGGGGCTACCGAATCAAAGATCACACATTGAATGTTATGAGTTTCTGTGTAAGGTGAAGCCATGCCCAAATCATCAGTCTTTGACTTATATCCCTTGTAAGGGACACTGGCAGAAGCAGAGCACCACCCCTGTTCCTCAAACAACTGCTTCAGCACCAGAGCCTGTAACTTACAAGTCTCTCAAACCACATCGGTTGAGATTGTAA 1368 0.4298 MRTKSLFFSFLALSFLLHFQCLVIAQELASSEREALEQIEPERKTLEIIIGGGGGGPAPSPAYCPPPPPPPCPPPPLSRLEKARRVLLNFKTLIYDPNGYTNNWNQRTTNTCDFNGIRCAIYPKSKDLAVAGLDFNQAKLCGKNGKSLSLTGILDRIQDLTFFHVNSNFFSGSVPKEITKYPFFFELDLSNNKLDGEFPKDVLQSKKLVFLDLRFNNIYGSIPPQLFNLDLDVIFINNNKFSQYLPDNFGSTPARYLTFANNQLTGPIPRSIGNASKTLTEVLFLGNKFDGCLPYEIGYLKKATVFDVSNNSLTGPIPLSFGCLEKIRYLNLADNKFYGVIPENVCLLPGIRNDGNLSLANNYFTGLGPACWKLLKSKVLNVANNCIPGLPNQRSHIECYEFLCKVKPCPNHQSLTYIPCKGHWQKQSTTPVPQTTASAPEPVTYKSLKPHRLRL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02367 455 Gene3D Ribonuclease Inhibitor 255 419 IPR032675 -
Rops2g02367 455 SUPERFAMILY L domain-like 82 388 - -
Rops2g02367 455 Gene3D Ribonuclease Inhibitor 80 254 IPR032675 -
Rops2g02367 455 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 436 - -
Rops2g02367 455 Pfam Leucine rich repeat N-terminal domain 83 119 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02367 Rops-Chr2 37985173 37986690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02367 79 409 Trihelix Transcription Factor Family AT1G12040 42.262 1.63e-76 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02367 - - psat:127108214 583.178