Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02318 ATGGCTACCTCAAGTAAATCTACGCCAGTAATGGGTTCAGACCCGTTGGAACAGAAGGGGAAAAGTCTCAAAAATCCAGTAGCTATCCTTTGGGATATTGAAAATTGTCATGTTCCAAGGGATGTACGCCCTGAAGATATAGCAGGAAACATTATTAAGGCTTTGAAGCAGCTCCCAGTAATTAATGGGCCGGTGGTAGAATTATCTGCTTATGGGAATGTCTATGCTTTGCCACAGCCACTTCAAGAAGGCTGTCAGAGAACTGGTGTTAATCTTATTCAAGTTTCAAGTGGGAGAAAAAATGCTGCTGATATGGCTATCATGGATGGCATGTTATCATTTGCTCTCGACAACCCTCCACCATCTTCTATCATGCTGATATCCGGAGATGTTGATTTTGCACTGACGCTTAACAATCTTCGTCTGCGAGGATATACCGTAATTCTTGCCATCCCAGCTGGGGTGGGTGTTTCTCGTGCCTTATGCAATGCTGGCAATTTTGTCTGTGACTGGCCTAGCATGGCTCGTGGAAAAGGCTTTGTGACCCGTAAATGA 555 0.445 MATSSKSTPVMGSDPLEQKGKSLKNPVAILWDIENCHVPRDVRPEDIAGNIIKALKQLPVINGPVVELSAYGNVYALPQPLQEGCQRTGVNLIQVSSGRKNAADMAIMDGMLSFALDNPPPSSIMLISGDVDFALTLNNLRLRGYTVILAIPAGVGVSRALCNAGNFVCDWPSMARGKGFVTRK* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02318 184 PANTHER LIMKAIN B LKAP 17 173 IPR024768 GO:0005777|GO:0010468
Rops2g02318 184 CDD PIN_limkain_b1_N_like 26 152 - -
Rops2g02318 184 Gene3D - 18 173 - -
Rops2g02318 184 Pfam NYN domain 26 165 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02318 Rops-Chr2 37260142 37260696 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02318 23 177 C2H2 Transcription Factor Family AT5G61190 39.355 1.48e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02318 - - gmx:100818186 239.195