Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02315 ATGGCTACCTCAAGTAAATCTACGCCAGTAATGGGTTCAGACCCGTTGGAACAGAAGGGGAAAAGTCTCAAAAATCCAGTAGCTATCCTTTGGGATATTGAAAATTGTCATGTTCCAAGGGATGTACGCCCTGAAGATATAGCAGGAAACATTATTAAGGCTTTGAAGCAGCTCCCAGTAATTAATGGGCCGGTGGTAGAATTATCTGCTTATGGGAATGTCTATGCTTTGCCACAGCCACTTCAAGAAGGCTGTCAGAGAACTGGTGTTAAACTTATTCAAGTTCCAAGTGGGAGAAAAAATGCTGCTGATATAGCTATCTTGAATGGCATGATATCACTTGCTCTCGACAACCCTCCACCATTTTCTATCATGCTGATATCTGGAAATGTTGTTGATTTTGCACTGACGCTTAACAATCTTCGTCTGCGAGGATATACCGTAATTCTTGCCATCCCAGCTGGGGTGGGTGTTTCTCGTGCCTTATGCAATGCTGGCAATTTTGTCTGTGACTGGCCTAGCATGGCTCGTGGAAAAGGCTTTGTGTCCCGTAAATGA 558 0.4391 MATSSKSTPVMGSDPLEQKGKSLKNPVAILWDIENCHVPRDVRPEDIAGNIIKALKQLPVINGPVVELSAYGNVYALPQPLQEGCQRTGVKLIQVPSGRKNAADIAILNGMISLALDNPPPFSIMLISGNVVDFALTLNNLRLRGYTVILAIPAGVGVSRALCNAGNFVCDWPSMARGKGFVSRK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02315 185 Gene3D - 18 174 - -
Rops2g02315 185 CDD PIN_limkain_b1_N_like 26 153 - -
Rops2g02315 185 PANTHER LIMKAIN B LKAP 17 175 IPR024768 GO:0005777|GO:0010468
Rops2g02315 185 Pfam NYN domain 26 166 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02315 Rops-Chr2 37217834 37218391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02315 23 178 C2H2 Transcription Factor Family AT5G61190 39.103 1.56e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02315 - - gmx:100818186 233.032