Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02310 ATGAACTTCAGGAACTTAGGTGATAACACCACTTGGGATGCTATGTGTAGTGGTGGGAAGCCACAAGCAAATGTCGGTCTTGTGAGGCAGTCCTCAGTATTCTCCTTGACTTTTGATGAGCTCCAGAACACCATGGGTGGAATGGGGAAAGATTTTGGATCCATGAACATGGATGAACTCTTGAAGAACATATGGACAGCTGAAGAGACTCAAGCCTTGGCATCTTTATCTGGTGGTGGAGGAGGAGAAGGTCATAACCAAAATGGTAATTTGCAAAGACAAGGTTCTTTAACATTGCCAAGGACTCTTAGTCAGAAAACAGTTGATGAGGTTTGGAGGGACTTGATCAAAGATGGTGGTGGAGCCAAAGATGGGAGTGTCAATGGTGGTTCATCTATTCCTCAAAGGCACCCAACATTAGGAGAAATGACTTTGGAGGATTTCTTGCTGAGAGCTGGGGTAGTGAGAGAAGACACGCCTCAACAAATTGGAAGACCAAATAATAATGCATGGTTTGGTGACTTTTCTAGGTCAAACAATAACCTCACTGGTCAACTTCTTGGCTTTCAACAACCAAACCGAAATAATGGGAATTTGGGTGACAACAGGATGATGGAGGGCAATAACTTAGTTCCTAAACATCTTCCTCCTTCATCAATAAACTCAAACCACTCTCAGAGACAACAACAGCATCAGCAGCAGCCACCAACACTTTTCCCAAAACCAGCAAATGTAGCTTTTGCTGCTCCTATTCATTTGTTAAACAATGCTCAACTTGCTAGCTCTGGCAGGAGGGGAGGGATGATTGGAGTTCCTGAACATTCAATGAATGGTACATTAGTTCAAAACAGTGGTGTTGGAATGCTTGGTTTAGCCACAGCCAATGCCACAGCTCCCTGTGCTTCTCCAGGAAGTAAAATATCATCAGATGTAATTACAAAGAGTAATGTAGATACCTCTTCACTGTCACCAGTTCCTTATGTAATCAACAGGGGAAGGAAGTGTGGTGCCATAGAGAAAGTTGTTGAGAGGAGACAAAGGAGAATGATAAAAAATAGAGAATCAGCTGCAAGGTCAAGGGCTCGCAAGCAGGCCTACACTTTCGAACTAGAGGCAGAAGTTGCAAAACTTAAGGAATTAAACAGGGAATTACAAAAAAAACAGACAGAATTCATGGAAATGCAGAAAAATAAGGATTTGGACTCTTTGTACCGGCCCCGGGTAAGTAAAAGACAATGCTTGAGGAGGACACTTACAGGTCCATGGTAG 1269 0.4303 MNFRNLGDNTTWDAMCSGGKPQANVGLVRQSSVFSLTFDELQNTMGGMGKDFGSMNMDELLKNIWTAEETQALASLSGGGGGEGHNQNGNLQRQGSLTLPRTLSQKTVDEVWRDLIKDGGGAKDGSVNGGSSIPQRHPTLGEMTLEDFLLRAGVVREDTPQQIGRPNNNAWFGDFSRSNNNLTGQLLGFQQPNRNNGNLGDNRMMEGNNLVPKHLPPSSINSNHSQRQQQHQQQPPTLFPKPANVAFAAPIHLLNNAQLASSGRRGGMIGVPEHSMNGTLVQNSGVGMLGLATANATAPCASPGSKISSDVITKSNVDTSSLSPVPYVINRGRKCGAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKELNRELQKKQTEFMEMQKNKDLDSLYRPRVSKRQCLRRTLTGPW* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02310 422 MobiDBLite consensus disorder prediction 81 102 - -
Rops2g02310 422 MobiDBLite consensus disorder prediction 117 140 - -
Rops2g02310 422 CDD bZIP_plant_BZIP46 344 398 - -
Rops2g02310 422 MobiDBLite consensus disorder prediction 186 203 - -
Rops2g02310 422 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 28 422 IPR043452 GO:0003700|GO:0045893
Rops2g02310 422 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 342 399 - -
Rops2g02310 422 Pfam bZIP transcription factor 344 396 IPR004827 GO:0003700|GO:0006355
Rops2g02310 422 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 347 362 IPR004827 GO:0003700|GO:0006355
Rops2g02310 422 SMART brlzneu 340 406 IPR004827 GO:0003700|GO:0006355
Rops2g02310 422 MobiDBLite consensus disorder prediction 74 102 - -
Rops2g02310 422 MobiDBLite consensus disorder prediction 214 239 - -
Rops2g02310 422 Gene3D - 342 399 - -
Rops2g02310 422 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 342 387 IPR004827 GO:0003700|GO:0006355
Rops2g02310 422 SUPERFAMILY Leucine zipper domain 344 392 IPR046347 GO:0003700|GO:0006355
Rops2g02310 422 Coils Coil 363 397 - -
Rops2g02310 422 MobiDBLite consensus disorder prediction 186 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02310 Rops-Chr2 37151005 37154258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02310 1 422 bZIP Transcription Factor Family AT4G34000 46.983 3.84e-107 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops2g02310 bZIP_1 3.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02310 K14432 - gmx:100776600 548.895