Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02302 ATGGCTAAGAAGCCTAAGCTTCCTCCAGGTTCAATGGGTTGGCCTTATATAGGAGAGACCCTTCAACTTTATTCTCAAGACCCTAACATCTTCTTTGCTTCAAAGCAAAAAAGATATGGGGAAATTTTTAAAACACACCTACTAGGTTGTCCATGTGTGATGTTGGCAAGTCCTGAGGCTGCAAGGTTTGTGCTGGTGACTCATGCTCACTTGTTCAAGCCTACATACCCCAAAAGCAAAGAGAAGCTTATTGGTCCTGCTGCATTATTCTTTCACCAAGGAGAATACCACACTCGCATTAGGAAGCTTGTTCAAACCTCGCTTTCTCCTGAAACAATCCGAAAACTGATTCCCGACATCGAAACCGAGGTCATTTCAGCCTTGGAATCGTGGGTTTCTAGTGGACATGTCATTAACGCTTTCCAAGAAATGAAACAGATCTCTTTCAATATTGGCATCCTCTCTGTCTTTGGTCACTTGGAAAGCAATTATAGAAAGCAGCTTAAGAAGAATTATTGCATAGTAGAAAAAGGCTACAATTCTTTCCCAACAAGGATTCCAGGAACTGCATACTCCAAAGCACTTTTGGCAAGGAAGAGAATCCGAGAGATTATAAGTGAGATAATTTGTAAGAGAAAGGAGCAGAGGTTGATTGAGAAGGATCTATTAGGCCACTTGCTGAACTACAAGGATGAAAAGGGACAAACGCTCACGGATGAACAAATAGCTGATAATGTAATTGGGGTACTATTTGCAGCTCAGGATACTACAGCAAGTGTTCTAACTTGGATTCTCAAGTATCTTCATGATGACCAGAAGCTTCTTGAAGCAATAAAAGCAGAGCAAATGGCAGTATATGAAGCCAATGAAGGAGGGAAGTTGCCATTAACATGGGGTCAAAGTAGAAACATGCCAATTACTTATAGGGTAATATTGGAAAGCCTGAGGATGTCAAGCATCATATCCTTTACCTTTAGGGAAGCTGTGGTTGATGTAGTATACAAGGGATATCTTATACCAAAGGGTTGGAAAGTAATGCCACTGTTCAGGAACATCCATCATAATCCAGAATTCTACCCTGCTCCTCACAATTTTGACCCTTCAAGGTTTGAGGTTGCTCCAAAGCCCAATACTTTTATGCCATTTGGTAACGGAGTGCACTCTTGTCCAGGAAATGAGCTTGCCAAATTGAACATGCTGATTTTAATTCATCATCTAGTAACCAAGTTTAGGTGGGAGGTAGTGGGATATCATAGTGGAATTCAATATAGCCCATTCCCAGTCCCTCAACATGGTCTACCTACAAGATTTTGGAGAAACGAATAG 1326 0.4118 MAKKPKLPPGSMGWPYIGETLQLYSQDPNIFFASKQKRYGEIFKTHLLGCPCVMLASPEAARFVLVTHAHLFKPTYPKSKEKLIGPAALFFHQGEYHTRIRKLVQTSLSPETIRKLIPDIETEVISALESWVSSGHVINAFQEMKQISFNIGILSVFGHLESNYRKQLKKNYCIVEKGYNSFPTRIPGTAYSKALLARKRIREIISEIICKRKEQRLIEKDLLGHLLNYKDEKGQTLTDEQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMAVYEANEGGKLPLTWGQSRNMPITYRVILESLRMSSIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHNFDPSRFEVAPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVVGYHSGIQYSPFPVPQHGLPTRFWRNE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02302 441 PANTHER CYTOCHROME P450 26 6 429 - -
Rops2g02302 441 FunFam Abscisic acid 8 1 439 - -
Rops2g02302 441 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 382 391 IPR017972 GO:0005506|GO:0016705
Rops2g02302 441 PRINTS P450 superfamily signature 380 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 PRINTS P450 superfamily signature 252 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 PRINTS P450 superfamily signature 309 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 CDD CYP90-like 36 436 - -
Rops2g02302 441 Gene3D Cytochrome P450 1 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 Pfam Cytochrome P450 8 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 PRINTS E-class P450 group I signature 389 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 PRINTS E-class P450 group I signature 241 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 PRINTS E-class P450 group I signature 308 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 PRINTS E-class P450 group I signature 379 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 PRINTS E-class P450 group I signature 348 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 PRINTS E-class P450 group I signature 36 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02302 441 SUPERFAMILY Cytochrome P450 3 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02302 Rops-Chr2 36980988 36983619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02302 6 440 Cytochrome P450 AT3G19270 73.793 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02302 K09843 - gmx:100806350 832.402