Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02267 ATGTTCAATTGCTTGCCAAAGGGCTGTGATGCTTCGGTGCTCCTTGATGATACACCTTATTTCACGGGTGAAAAGAATGCCTCTCCTAATCGCAATTCACTTCGAGGGTTTGAAGTCATTGATAACATAAAACAAGAAGTTGAGAGGGTATGTCCATCAACAATTTCTTGTGCTGATATATTAGCATTTGCAACTAGGGAAGCTGTTTATCTGTCTGGAGGGCCTTTTTGGGATGTTGAATTAGGTCGACGTGATGCAATAACAACAAGTCAGGCAGCAGCTAATCGACAAATTCCCTCTCCTTTTGAGCCTCTAGAAAGCATCACTGCAAAGTTCGTTTCAAAGGGTCTTGACTTGAAGGATGTTGTGGTCCTTTCAGGAGGACATACTATTGGTTTTGCACGATGCATCTTCCTCAAAAGGAGACTATTTGACTTTCAAGGCTCTGGCAAACCTGATCCTATGCTTGACTCTTCACTTCTCTCAAAATTGCAAAGCATGTGTCCAAATAAAGAAACTTCAAATAGCAACATAGCTCCTCTTGATGGCACAAGTACTTTCATGTTTGACAATGCGTATTACAGAAATCTCATGAGCAACTCTGGACTTCTTGACTCTGACCAAGCACTAATTCGGGATCCAAGGACTGCTGCTTTGGTTAATTATTACAGCACTAACCAAATTTCCTTCCATTATGATTTTGCTGCATCCATGGTGAAGCTCAGTAATGTGGGAGTACTTACTGGGCAATATGGGCAAATTAGAAGGAAATGCGAAAATACAACTTCCATATGTTTGTTGGAAGTTTATGTTGGCGAGTGGAGCTCTGGTCTGTGTTCTCTCATCCACACAGATGTTACGAAGTATCTAAACTTTAAAGCTGTAGATGGAAGTTTTGTGTATAACATGGGAAAGGCATGCACCATATCCAGGAGGATTTGA 942 0.4119 MFNCLPKGCDASVLLDDTPYFTGEKNASPNRNSLRGFEVIDNIKQEVERVCPSTISCADILAFATREAVYLSGGPFWDVELGRRDAITTSQAAANRQIPSPFEPLESITAKFVSKGLDLKDVVVLSGGHTIGFARCIFLKRRLFDFQGSGKPDPMLDSSLLSKLQSMCPNKETSNSNIAPLDGTSTFMFDNAYYRNLMSNSGLLDSDQALIRDPRTAALVNYYSTNQISFHYDFAASMVKLSNVGVLTGQYGQIRRKCENTTSICLLEVYVGEWSSGLCSLIHTDVTKYLNFKAVDGSFVYNMGKACTISRRI* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02267 313 Gene3D - 3 259 - -
Rops2g02267 313 Pfam Peroxidase 4 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 Pfam GDP dissociation inhibitor 281 306 IPR018203 GO:0005092|GO:0007264
Rops2g02267 313 ProSiteProfiles Plant heme peroxidase family profile. 1 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 121 131 IPR019793 -
Rops2g02267 313 Gene3D Peroxidase, domain 2 99 241 - -
Rops2g02267 313 PANTHER PEROXIDASE 72-RELATED 3 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 PRINTS Plant peroxidase signature 196 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 PRINTS Plant peroxidase signature 120 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 PRINTS Plant peroxidase signature 35 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 PRINTS Plant peroxidase signature 180 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 PRINTS Plant peroxidase signature 236 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 PRINTS Plant peroxidase signature 73 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 PRINTS Plant peroxidase signature 54 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 SUPERFAMILY Heme-dependent peroxidases 3 259 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 CDD secretory_peroxidase 4 258 IPR033905 GO:0004601|GO:0042744
Rops2g02267 313 FunFam Peroxidase 99 241 - -
Rops2g02267 313 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 PRINTS Haem peroxidase superfamily signature 55 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 PRINTS Haem peroxidase superfamily signature 73 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g02267 313 PRINTS Haem peroxidase superfamily signature 121 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02267 Rops-Chr2 36193655 36200160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02267 3 258 Peroxidase AT1G49570 63.178 2.64e-116 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02267 K00430 - gmx:100812961 391.349