Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02264 ATGGATCCGTCTGCAATCACTGTTGGGCCAGGAATGGATATGCCGATCATGCATGATAGTGATCGCTATGAACTTGTGCGTGATATTGGTTCTGGCAATTTTGGTGTTGCTAGGCTTATGAGGGACAAACAGACAGATGAACTTGTTGCTGTTAAGTATATTGAGAGAGGTGAAAAGATAGATGAAAATGTACAAAGGGAAATTATAAATCACAGATCACTGAGGCATCCTAATATTGTCAGGTTCAAAGAGGTTATATTGACCCCAACACATTTGGCCATTGTAATGGAATATGCTTCTGGAGGAGAGCTATTTGAACGAATATGCAATGCAGGGCGGTTCAGTGAGGACGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGTGTTAGCTATTGTCATGCAATGCAAGTATGCCATCGTGACTTGAAGTTGGAAAACACGTTGTTGGATGGTAGTCCTGCTCCTCGTTTGAAGATTTGTGATTTTGGCTATTCAAAGTCCTCTGTACTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATATATTGCACCTGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAGGAACCTAAAAATTTCCGCAAGACAATACAAAGGATTTTGAATGTTCAGTATTCAATTCCTGACTATGTTCATATATCTCCCGAATGCCATCATCTAATCTCCAGGATTTTTGTTGCTGATCCTGCAAAGAGAATAACTATTCCTGAGATTAGAAACCATGAATGGTTTTTGAAGAACCTTCCAGCTGATCTAATGGATGGCAATGAAAACAACCAGTTTGAGGAGCCTGATCAGCCAATGCAAAGCATTGAAGAAATCATGCAGATAATTTATGAGGCTACAATTCCTGCAGCTGGAACTCAGTCTCGCGACCAGTATCTTACTGGTAGCTTGGATATCGAAGACGACATGGAGGAGGACATAGACACTGATCCTGAGCTTGATATAGATAGCAGTGGAGAAATAGTTTATGCTATGTAA 1089 0.4105 MDPSAITVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKQTDELVAVKYIERGEKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIQRILNVQYSIPDYVHISPECHHLISRIFVADPAKRITIPEIRNHEWFLKNLPADLMDGNENNQFEEPDQPMQSIEEIMQIIYEATIPAAGTQSRDQYLTGSLDIEDDMEEDIDTDPELDIDSSGEIVYAM* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02264 362 Gene3D Transferase(Phosphotransferase) domain 1 99 287 - -
Rops2g02264 362 SUPERFAMILY Protein kinase-like (PK-like) 15 300 IPR011009 -
Rops2g02264 362 CDD STKc_SnRK2-3 22 278 - -
Rops2g02264 362 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02264 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Rops2g02264 362 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Rops2g02264 362 Gene3D Phosphorylase Kinase; domain 1 3 98 - -
Rops2g02264 362 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Rops2g02264 362 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02264 362 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Rops2g02264 362 PANTHER SERINE/THREONINE KINASE 22 308 - -
Rops2g02264 362 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02264 Rops-Chr2 36129674 36133636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02264 16 301 CBL-interacting serine-threonine protein kinases AT4G24400 42.193 3.14e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Rops2g02264 Pkinase 3.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02264 K14498 - csav:115703234 686.411