Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02261 ATGAAGAAAGTTTCGGATGTAGCATTCAAGTTGTGGAAGAAAATCGATCGAGATGGAATGGTCCCCAAAGACTTCGTCGCCCCACCTTCCTTCGACGAAGGACCCCTCGAAACCAAAGACGAGATTGCAGCGGCATATAAGGAGATATTTGGTCCTGGATACAGCGGAGTGAAGAAGGACACTGGATTTGGTTCGGGTGCTAAGAAGGAGAAGATTAGGGATGGGTTTGAAGAGAGGATGGTTCAGGTTAGGAGGTTCACCAAAGTTGTTAAGGGAGGGAAGCAATTGAGGTTCAGGGATATTGTGGTTGTTGGTGATAAGAAAGGACAAGGGCATAAGGAATGGGTAACAGAAGTGAATGTTCTTGGAATTGTTGAGCATCCCAATCTTGTGAAACTAGAGGGCTATTGTGCTGATGATGATGAAAGAGGAATCCAGCGGCTTCTATTTTATGAATATATGCCCAATGGAAGTGTGGATCATCACTTATCCCCACGATCAGAAACTCCTCTTCCATGGAGTAGGAGATTGAAAATAGCCCAAGATGCAGCTCGTGGCTTAACATACCTGCATAAGGAAATGGATTTTCAGTCCAAATTCCCTACATTGAGTAGGTTGTATGAAACATACAAGACTTTGCCAGAGTTCCAGGCCTCATCACCACAAAGACAACCCGATGTTTGCATTCATACTGTGCTGGCTTTTTAA 708 0.4435 MKKVSDVAFKLWKKIDRDGMVPKDFVAPPSFDEGPLETKDEIAAAYKEIFGPGYSGVKKDTGFGSGAKKEKIRDGFEERMVQVRRFTKVVKGGKQLRFRDIVVVGDKKGQGHKEWVTEVNVLGIVEHPNLVKLEGYCADDDERGIQRLLFYEYMPNGSVDHHLSPRSETPLPWSRRLKIAQDAARGLTYLHKEMDFQSKFPTLSRLYETYKTLPEFQASSPQRQPDVCIHTVLAF* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02261 235 Pfam Ribosomal protein S5, N-terminal domain 76 110 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Rops2g02261 235 Gene3D - 194 232 - -
Rops2g02261 235 PANTHER OS01G0588500 PROTEIN-RELATED 76 193 - -
Rops2g02261 235 SUPERFAMILY Protein kinase-like (PK-like) 108 192 IPR011009 -
Rops2g02261 235 SUPERFAMILY dsRNA-binding domain-like 72 110 - -
Rops2g02261 235 ProSiteProfiles S5 double stranded RNA-binding domain profile. 76 110 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Rops2g02261 235 Gene3D Transferase(Phosphotransferase) domain 1 112 193 - -
Rops2g02261 235 ProSiteProfiles Protein kinase domain profile. 44 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02261 235 Pfam Protein tyrosine and serine/threonine kinase 108 193 IPR001245 GO:0004672|GO:0006468
Rops2g02261 235 Gene3D - 62 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02261 Rops-Chr2 36018525 36020896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02261 104 191 Receptor kinase-like Gene Family AT5G07280 51.087 1.20e-20 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops2g02261 PK_Tyr_Ser-Thr 2.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02261 - - gmx:100305438 178.718