Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02243 ATGATAGCCAGTTCCTTCTGCAATGCCGATTCTATGTTTTCAAGAGAAGAGGGGATAGATGTTAGAAAGATGATGGGACATAAAAGGAGGCCCTGCTCTGTTGATCAAAGCAGTTATACTTCTATTGCTTCTAAAAAGCAGAAGAATGATTTATCAATCAGCACCAAGGATAGGAAGGAAAAGCTTGGTGAACGAATTGTTGCTCTTCAGCAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCAATGGACTACATAGGATTCCTTCATAAACAAGTTAAGCTGCTCAGTGCTCCTTACCTCGAGAGTTCACCGACAACGCAGATGCAGGGTATAGAGCCATGCAGCTTGAGGAGTAGAGGTTTATGTCTTGTTCCTGTCTCATTTACTATTGGAGTTTCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATCAAGACAACTTCACCTAAATTTGATAAGGATGTCTCACAATTTCATTGA 501 0.4152 MIASSFCNADSMFSREEGIDVRKMMGHKRRPCSVDQSSYTSIASKKQKNDLSISTKDRKEKLGERIVALQQLVSPYGKTDTSSVLKEAMDYIGFLHKQVKLLSAPYLESSPTTQMQGIEPCSLRSRGLCLVPVSFTIGVSESNGADIWAPIKTTSPKFDKDVSQFH* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02243 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 112 IPR036638 GO:0046983
Rops2g02243 166 Gene3D - 43 115 IPR036638 GO:0046983
Rops2g02243 166 FunFam Transcription factor bHLH113 family 45 120 - -
Rops2g02243 166 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 46 136 - -
Rops2g02243 166 SMART finulus 52 101 IPR011598 GO:0046983
Rops2g02243 166 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Rops2g02243 166 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02243 Rops-Chr2 35799461 35804910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02243 24 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 52.532 2.67e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02243 - - gmx:100527660 304.679