Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02238 ATGTTGAAGGGAGGAGATGCCGTCAGAGAAGACGAAACGTTGCGGGAGGGGATGCTGCTGAAGGTTTCGTGCGACTATGAGTGTACTGGCCTTAAGAGTAGGTACAAAGTGCTAAAGGTTCATGCTTTTGCAACTCATCGATCCATTGATGAACCAAAGCAATCTCAGCCTGTGGATAATGATGAACATGGACAACCTGACCTTTCCTGCGTAGTCTTTCCGAATGAGAGATGCTGCCTCCTTGCTGGCGACCGTTCTGGAAGAAACAGTAATGCTACTGACATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATCAAGAGGGTTTTCACTCACCACTCCAAGGGGAAGGATTCAGATAATAAAAGCTCAAAAGAGAAGAAGAAAGGTGTAGGAAAACTAAGGCATGGAGAGACCAATTCTTTCATTCCCCTCTTCAGAGAGCCAAGCAGTATTGAGAAAATATTTGGGGAATTTGAAAGAGAGCAACAACTATTGTCAGTAAGGCCTCCCACACCACCTTATGTTCCTCCTAGAGCTGCTTCTCCCAGGGCTCCTTCTCCAAGGGCTCCATCTCCAAGGGCTGCTTCTCCTAGAGCTCCTTCTCCACGAGTTACCTCTCCAAAAGCTGCATCTTCCCGGAATGTTCATCACCACAAGGAGGTTGGCTACAGACCAGAACCAACTTTAAGGAACCAGCATGCCTCAGCTACTAAGATCCAGGCTGCTTACAGAGGTTATATGGCTAGGAGGAGTTTTAGAGCTCTGAAGGGTCTGGTTAGGCTTCAAGGAGTGGTAAAAGGACAGAATGTGAAGAGGCAGACAGTTAATGCCATGAAACACATGCAGCTGTTGGTGCGAGTTCAATCTCAGATTCAGTCTCGAAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGATGCTGCAAGTACCTTGAGCAAACTGACTTTTGGACGTGGTTCTGAAGCAGGGAACCATGAAGAGTGGGATGATAGCTTACTGACAAAAGAGGAAATAGAAGCAAGGTTGCAAAAGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACGTCAGTTATGGAAAGCCACTCCAAAATCAAATCAGACACCGGTGACAGCTATGCAATCTGGCGGATTTCCATGGTGGTGGAACTGGTTAGAAAGACAGCTTCCAGCAGCAAATCCACAAGAAAGGCAAGTCCTGAAGAATTTCCAACTTACACCTCCAAGACCATATTCAGAACAAAAGACTAGTCCAAGACCTGCCTCCAGCACTCAAAGGCAACAGCATCATTATGCCTTTGATAACATGGATACACCCACTCCAAAATCCACAAAATCAACCATACTCTTCCCATCTACAAAACCAGCCAGAACTCCTCCATATAGAACTCCACAAGCAAACACCTCAAGCATGTCAAAATATCCAAGGCCAAGGGGAGCCAATTCACCTTTTGATGTGGCACTGAAGGATGATGAGTCTCTCACAAGTTGCCCACCATTCTCAGTGCCAAACTACATGGCTCCAACAGTTTCTGCCAAGGCCAAAGTACGTGCTAATAGTAATCCAAGAGAAAGGTTTGGTGGTGGAAGTGGTGCTGCCACTCCAAGCAGTGATTCAAAGAGGAGACTTTCATTTCCTTTGTCACAAGGAATTGGATCTTTCAAATGGACTAAAGGGTCATTGTTCTCTAGTAAGGATCCAACTAGCTCACACAGGACCCCAGATAATAAATTTCAGTCAGTTGAATCATTAGGAAATGTGAGTGTGGATTCAACAGTATCATTGCCCGCAAGGGTGGGAGGAAGGAAGCCTTTTACAAGATTTGTGTGA 1866 0.4555 MLKGGDAVREDETLREGMLLKVSCDYECTGLKSRYKVLKVHAFATHRSIDEPKQSQPVDNDEHGQPDLSCVVFPNERCCLLAGDRSGRNSNATDMGKKGSWFSAIKRVFTHHSKGKDSDNKSSKEKKKGVGKLRHGETNSFIPLFREPSSIEKIFGEFEREQQLLSVRPPTPPYVPPRAASPRAPSPRAPSPRAASPRAPSPRVTSPKAASSRNVHHHKEVGYRPEPTLRNQHASATKIQAAYRGYMARRSFRALKGLVRLQGVVKGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDAASTLSKLTFGRGSEAGNHEEWDDSLLTKEEIEARLQKKVEAIIKRERAMAFAYSRQLWKATPKSNQTPVTAMQSGGFPWWWNWLERQLPAANPQERQVLKNFQLTPPRPYSEQKTSPRPASSTQRQQHHYAFDNMDTPTPKSTKSTILFPSTKPARTPPYRTPQANTSSMSKYPRPRGANSPFDVALKDDESLTSCPPFSVPNYMAPTVSAKAKVRANSNPRERFGGGSGAATPSSDSKRRLSFPLSQGIGSFKWTKGSLFSSKDPTSSHRTPDNKFQSVESLGNVSVDSTVSLPARVGGRKPFTRFV* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02238 621 ProSiteProfiles IQ motif profile. 232 260 IPR000048 GO:0005515
Rops2g02238 621 Pfam Protein of unknown function (DUF4005) 490 562 IPR025064 -
Rops2g02238 621 MobiDBLite consensus disorder prediction 169 197 - -
Rops2g02238 621 MobiDBLite consensus disorder prediction 112 135 - -
Rops2g02238 621 MobiDBLite consensus disorder prediction 165 220 - -
Rops2g02238 621 MobiDBLite consensus disorder prediction 415 488 - -
Rops2g02238 621 MobiDBLite consensus disorder prediction 415 497 - -
Rops2g02238 621 Pfam IQ calmodulin-binding motif 233 253 IPR000048 GO:0005515
Rops2g02238 621 PANTHER IQ-DOMAIN 5-RELATED 95 560 - -
Rops2g02238 621 MobiDBLite consensus disorder prediction 112 134 - -
Rops2g02238 621 SMART iq_5 231 253 IPR000048 GO:0005515
Rops2g02238 621 Gene3D - 213 252 - -
Rops2g02238 621 MobiDBLite consensus disorder prediction 525 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02238 Rops-Chr2 35719171 35734519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02238 95 620 IQD Protein Family AT3G59690 51.845 4.02e-152 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02238 - - lang:109331805 746.117