Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02230 ATGGAAGGAGGAGGAGGTGCTCCACCTGCTGACACCGTCATGTCCGATGCGGCACCGCCGCCGCAGCCGGACCATCAACAGCAGCAGCAGCAGCCGGTGGCGATGGGGATCGAGAATATTCCGGCGACACTTAGCCACGGTGGAAGGTTCATTCAATACAACATATTTGGTAACATATTCGAAGTAACTGCGAAATACAAACCCCCCATCATGCCAATCGGAAAAGGCGCTTACGGTATCGTTTGCTCGGCTTTGAATTCGGAGACGAATGAGCATGTTGCTATCAAGAAGATTGCCAATGCATTTGACAACAAAATTGATGCCAAGAGGACCCTACGTGAAATCAAGCTGCTTCGCCACATGGATCATGAAAACGTGGTAGCAATCAGGGATATAGTGCCACCACCTCAAAGGGAGGCATTCAATGATGTTTACATTGCATATGAGCTAATGGATACTGACCTTCACCAAATCATCCGATCAAATCAAGGGTTATCAGAGGAGCACTGTCAGTATTTTCTGTATCAAATCCTCCGTGGTTTGAAGTACATACATTCTGCAAATGTTCTGCATAGGGACTTAAAACCTAGCAACCTTCTCCTGAACGCCAACTGTGACTTGAAAATTTGTGATTTTGGACTGGCTCGTGTCACCTCTGAAACTGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTAAACTCATCTGATTACACAGCAGCAATTGATGTATGGTCTGTTGGTTGTATTTTCATGGAGCTAATGGATCGAAAGCCTTTGTTTCCTGGCAGAGATCATGTGCATCAGTTGCGTCTACTTATGGAGCTGATTGGCACCCCATCAGAAGCTGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATATATTAGGCAACTACCTCTTTACCGCCGACAATCTTTCCAAGAAAAGTTTCCCCATGTCCATCCTGAAGCTATAGATCTTGTTGAAAAAATGTTGACTTTTGATCCTAGACAAAGGATTACAGTTGAAGGTGCACTGGCACACCCCTACTTAACATCTCTGCATGACATCAGTGATGAACCGGTGTGCATGACTCCCTTCAGCTTTGACTTTGAACAACATGCTTTGACTGAGGAACAGATGAAAGAACTGATATACCGAGAGGCTCTAGCATTTAACCCTGAGTATCAGCAGTAG 1200 0.4483 MEGGGGAPPADTVMSDAAPPPQPDHQQQQQQPVAMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREAFNDVYIAYELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYRRQSFQEKFPHVHPEAIDLVEKMLTFDPRQRITVEGALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYQQ* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02230 399 CDD STKc_TEY_MAPK 60 395 - -
Rops2g02230 399 ProSitePatterns Protein kinases ATP-binding region signature. 73 97 IPR017441 GO:0005524
Rops2g02230 399 FunFam Mitogen-activated protein kinase 151 379 - -
Rops2g02230 399 SMART serkin_6 67 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02230 399 Gene3D Transferase(Phosphotransferase) domain 1 151 379 - -
Rops2g02230 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Rops2g02230 399 Gene3D Phosphorylase Kinase; domain 1 50 389 - -
Rops2g02230 399 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 65 353 - -
Rops2g02230 399 ProSitePatterns MAP kinase signature. 102 205 IPR003527 GO:0004707|GO:0005524|GO:0006468
Rops2g02230 399 MobiDBLite consensus disorder prediction 1 32 - -
Rops2g02230 399 FunFam Mitogen-activated protein kinase 52 161 - -
Rops2g02230 399 ProSiteProfiles Protein kinase domain profile. 67 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02230 399 SUPERFAMILY Protein kinase-like (PK-like) 72 360 IPR011009 -
Rops2g02230 399 Pfam Protein kinase domain 72 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02230 Rops-Chr2 35591604 35596274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02230 1 399 MAP Kinase Gene Family AT2G43790 87.469 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Rops2g02230 Pkinase 1.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02230 K14512 - gmx:547616 763.451