Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02228 ATGTTGACAATCTTAAACATTATAGTATTGTTGTCACTTGTTTTATGTGCTTCCTCCACTGTTGAACTCCATAACCGCCGTGTTCTCCACCAACCACTGTTTCCAAGAATCTCTGTTCCTCCAGCACAAGCACCAAGTTCATCTCCACAACACCAACCCAAACCACAAAAACAACAACCCAAGCTTCCATTTTCTTCGTCTTCTTCTTCTTCTTCTTCGTCTTCACCACAAAAGCCTTTCTTCCCTTCTTACCATTCCCCACCACTCCCTCCTTCTCCACCTGTCATCGCCACATTCCCAGCTAATATCTCCTCTTTACTCCTTCCCCGACCTTACTCCCATCACCACCGCCACGCTGCTGCCGTCGCCGTCGCCGTTTGCCTCTCTGTACTCTCCCTAACTCTTCTCGCCGCCGCTGCCTTCGTTTACCGTCGTCGCAGCCACACCTCTTCCACCGCCGCCGATGATGACGACAAGGCTTCGAGATCAGACAGTCTACGGTTATTCCCGCCGAACACCGCCACCTCCGACGGTGGCGAAAGCAAGCCACGTGGCAAGTCGAGCCCCAGGTCGGAGGTACTCTACCTTGGCACGGTGGCAGGTTCAGATGAAGCGAGAGGCACCGCCGGAGACTCGAGCTGCAGCGGCAATGTGCCGCCGTACCGGAAACTTGGGGACTCACCGGAGCTGAATCCACTTCCTCCACTGCCACGTCACAATTTCAGGGCATGGACGAGTGAAGAGAAGAATGAAGAGGAAGATGAAGAGGAACAGTTTTTTTCTCCAAAAGGGTCTTCTTCTGGGAACAGACAACAGAGTCCTCCTTCACCTGCTCTTGCTGCTACAAGCTCTCGCTCACTGAATATCTTTGATAAATTTGGAAGCAGAAGCTTCACTTCAAGAACCCCATCTTACCCTCGTTCTAATTCTCTTTCCAGCTCAGTTTCTCTTTCAGCTTCTCTAAATTTCAGCCCTGGAAGCATCAAATCATTGCCTCCTCAAAATCCAGCTTCTCCATCTTATTCTTCTGCTTCACCTTCTTCTCCTAAGCCAAGGGAGGACTTGACTTCCAATTGGGATGTTTCCGGTGACGGGAAGAGTTCTCAGGCGACCAAACTGCCTCCTCCACCGCCACCACCGCCTCCACGGTTTTGGGAGACTCCGGTTGTAGCTAAATTGGCTCAACAGTCACAAAATCTTAATGTTGGTGTTAAGAATGAGAATGAGGAGACTCCAAAGCCAAAGTTGAAAGCTTTACATTGGGATAAAGTTAAGGCCAGCTCGGATAGGGCCATGGTTTGGGATCGCATGAGACCAAGTTCTTTCCAATTGAACGAGGACATGATTGAGACACTTTTTATGGTAAATAATTCCAATAGAAATTCGGGTTTGGACAATGCTAAGCGTCAAATAACTCATTCTTCTCCAATGCCACCGGAAAATAGGGTGCTCGATCCTAAGAAGTCTCAGAACATTGCTATCTTGCTTCGGGCACTAAATGTAACTATTGATGAAGTTTGTGAAGCCCTCAGGGAAGGCAATTGTGATACATTGGGAACAGAACTTCTAGAAAGTCTATTAAAGATGGCTCCAACCAAAGATGAAGAATCTAAGCTGAAGGAGTTTCAAGATGAATCGCCCTTCAAGCTTGGCCCAGCTGAGAAATTTCTTAGAGTCATGCTTGATATACCTTTTGCATTCAAGAGAGTGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTGGAATATCTTAAGAAGTCCTTTGAAACTCTGGAGGTGGCTTGTGAGGAATTAAGGAATAGCAGAATGTTTTTGAAAATACTTGAAGCAGTGTTGAGAACAGGAAATCGTATGAATGATGGCACCAATCGTGGTGATGCACATGCATTCAAACTGGACACACTTTTGACGTTAGTTGATATTAAAGGAACTGATGGAAAGACTACTCTCTTGCATTTCGTTGTCCAGGAAATAGTCAGAACCGAGGGTTCTCATATTTCCAGTGCTGATTATCCTCACGATTCTGACAACATCCAGCAATATACTCTTCAAGACGAAGTCGACTTTAGGAAACTTGGACTGCAAGTTGTTTCTGGCTTGAGTGGGGAGCTCACCAACGTTAAAAAAGCAGCTGCTATGGATTCAGACATGCTCAGTAGTGATGTTGCCAAACTTGCCAGAGGAATTGAAAAAGTTGTGCAAGTTGTAAAATTGAATGAAGAGTCACCTTTGAAAGAAACTAACCAGAAATTTTCTGAGGCAATGAAAGGATTCTTGGAGAGGGGAGAGGAAGAGATTTCTAGAATCCAGGTCCAAGAGAAAAATGCTCTTTCTTCAGTAAAGGAGATAACTCAGTATTTCCATGGAAATTCAGCAAAGGAAGAAGCTCATCCATTTAGAATTTTTATGGTTGTGAGGGATTTCCTTTCAATACTAGATGGTGTTTGCAAGGAAGTTGGGAAAGTAAATGAGAGGACTTTAGTCGGTTCCCGTCAATATGTAATGCCTTCAAACCCTACACTGCCATCAATTTTCCCTGAGATTATTGGTAAGCAGCCATTTGATTCTTCAGAATCTGATTAA 2589 0.4515 MLTILNIIVLLSLVLCASSTVELHNRRVLHQPLFPRISVPPAQAPSSSPQHQPKPQKQQPKLPFSSSSSSSSSSSPQKPFFPSYHSPPLPPSPPVIATFPANISSLLLPRPYSHHHRHAAAVAVAVCLSVLSLTLLAAAAFVYRRRSHTSSTAADDDDKASRSDSLRLFPPNTATSDGGESKPRGKSSPRSEVLYLGTVAGSDEARGTAGDSSCSGNVPPYRKLGDSPELNPLPPLPRHNFRAWTSEEKNEEEDEEEQFFSPKGSSSGNRQQSPPSPALAATSSRSLNIFDKFGSRSFTSRTPSYPRSNSLSSSVSLSASLNFSPGSIKSLPPQNPASPSYSSASPSSPKPREDLTSNWDVSGDGKSSQATKLPPPPPPPPPRFWETPVVAKLAQQSQNLNVGVKNENEETPKPKLKALHWDKVKASSDRAMVWDRMRPSSFQLNEDMIETLFMVNNSNRNSGLDNAKRQITHSSPMPPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKDEESKLKEFQDESPFKLGPAEKFLRVMLDIPFAFKRVDAMLYIANFDSELEYLKKSFETLEVACEELRNSRMFLKILEAVLRTGNRMNDGTNRGDAHAFKLDTLLTLVDIKGTDGKTTLLHFVVQEIVRTEGSHISSADYPHDSDNIQQYTLQDEVDFRKLGLQVVSGLSGELTNVKKAAAMDSDMLSSDVAKLARGIEKVVQVVKLNEESPLKETNQKFSEAMKGFLERGEEEISRIQVQEKNALSSVKEITQYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKEVGKVNERTLVGSRQYVMPSNPTLPSIFPEIIGKQPFDSSESD* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02228 862 PANTHER FORMIN-RELATED 10 844 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Rops2g02228 862 SMART it6_source 406 829 IPR015425 -
Rops2g02228 862 MobiDBLite consensus disorder prediction 166 182 - -
Rops2g02228 862 MobiDBLite consensus disorder prediction 146 386 - -
Rops2g02228 862 Pfam Formin Homology 2 Domain 408 814 IPR015425 -
Rops2g02228 862 Gene3D Formin, FH2 domain 401 825 IPR042201 -
Rops2g02228 862 SUPERFAMILY Formin homology 2 domain (FH2 domain) 374 827 - -
Rops2g02228 862 MobiDBLite consensus disorder prediction 261 369 - -
Rops2g02228 862 ProSiteProfiles Formin homology-2 (FH2) domain profile. 406 840 IPR015425 -
Rops2g02228 862 MobiDBLite consensus disorder prediction 371 386 - -
Rops2g02228 862 MobiDBLite consensus disorder prediction 41 80 - -
Rops2g02228 862 MobiDBLite consensus disorder prediction 149 164 - -
Rops2g02228 862 MobiDBLite consensus disorder prediction 40 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02228 Rops-Chr2 35549703 35554299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02228 409 854 FH2 protein (formin) Gene Family AT3G25500 67.338 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02228 - - gmx:100786203 1050.81