Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g02191 | ATGGGTTCTGAAGACGAAGATCATTATGAGCATAGTAATTACCATGTTACAGTCCTTACCATCATTCTAGCTTCAACTTTGTTTTTAGTTGGTATCACAGTGCTTATCACTCTCCTCTATTTCTATGTAAAATATCTCCAAAGACGCCAACAAAGAACACGCCTCCACAATCTTGTTTCTCGTGTTAGACCTCAAATTGCACCCATAAATGTGGAATCACCAAATTGTGGCCTTGACCCTTTAATCATAGCCTCTCTCCCTAGAATCTTGTACAAGGAAACGGACCATTTCATGCAAGGTGAAGTCATGGAGTGCTCGGTTTGCTTAACAACTATTATTGAAGATGCAACCATTAGGGTACTTCCAAATTGTAAGCACATGTTCCATGTTGATTGTGTTGATATGTGGTTTGGTTCCAATAACACTTGCCCAGTTTGTAGAGCTGTGGTTGAACCCATGGTGCATGAACATCTGGCCACACCCACAGCACCATTGGTTGAGGATGTTGGTGTGTCACAAGATGCAAATCATGAATTGGAAAAAGTGGGTTGCTCGGGTTTGAGAATAGCTTCATTTTCTAGGATGGGTATTAGCAGGGAAAGATCGATAAAGAATCAGAGCTCTGATGGGTGTGATTCCGTAGAAGATGTAGAGAAGCAATGA | 663 | 0.4133 | MGSEDEDHYEHSNYHVTVLTIILASTLFLVGITVLITLLYFYVKYLQRRQQRTRLHNLVSRVRPQIAPINVESPNCGLDPLIIASLPRILYKETDHFMQGEVMECSVCLTTIIEDATIRVLPNCKHMFHVDCVDMWFGSNNTCPVCRAVVEPMVHEHLATPTAPLVEDVGVSQDANHELEKVGCSGLRIASFSRMGISRERSIKNQSSDGCDSVEDVEKQ* | 221 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g02191 | 220 | SMART | ring_2 | 105 | 146 | IPR001841 | - | |
Rops2g02191 | 220 | ProSiteProfiles | Zinc finger RING-type profile. | 105 | 147 | IPR001841 | - | |
Rops2g02191 | 220 | SUPERFAMILY | RING/U-box | 87 | 153 | - | - | |
Rops2g02191 | 220 | MobiDBLite | consensus disorder prediction | 201 | 220 | - | - | |
Rops2g02191 | 220 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 153 | IPR013083 | - | |
Rops2g02191 | 220 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 11 | 150 | IPR044675 | - | |
Rops2g02191 | 220 | Pfam | Ring finger domain | 104 | 147 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g02191 | Rops-Chr2 | 34869986 | 34870648 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g02191 | 1 | 220 | C3H Transcription Factor Family | AT2G42360 | 34.016 | 2.75e-31 | 113 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g02191 | K19038 | - | gmx:100779105 | 215.312 |