Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02191 ATGGGTTCTGAAGACGAAGATCATTATGAGCATAGTAATTACCATGTTACAGTCCTTACCATCATTCTAGCTTCAACTTTGTTTTTAGTTGGTATCACAGTGCTTATCACTCTCCTCTATTTCTATGTAAAATATCTCCAAAGACGCCAACAAAGAACACGCCTCCACAATCTTGTTTCTCGTGTTAGACCTCAAATTGCACCCATAAATGTGGAATCACCAAATTGTGGCCTTGACCCTTTAATCATAGCCTCTCTCCCTAGAATCTTGTACAAGGAAACGGACCATTTCATGCAAGGTGAAGTCATGGAGTGCTCGGTTTGCTTAACAACTATTATTGAAGATGCAACCATTAGGGTACTTCCAAATTGTAAGCACATGTTCCATGTTGATTGTGTTGATATGTGGTTTGGTTCCAATAACACTTGCCCAGTTTGTAGAGCTGTGGTTGAACCCATGGTGCATGAACATCTGGCCACACCCACAGCACCATTGGTTGAGGATGTTGGTGTGTCACAAGATGCAAATCATGAATTGGAAAAAGTGGGTTGCTCGGGTTTGAGAATAGCTTCATTTTCTAGGATGGGTATTAGCAGGGAAAGATCGATAAAGAATCAGAGCTCTGATGGGTGTGATTCCGTAGAAGATGTAGAGAAGCAATGA 663 0.4133 MGSEDEDHYEHSNYHVTVLTIILASTLFLVGITVLITLLYFYVKYLQRRQQRTRLHNLVSRVRPQIAPINVESPNCGLDPLIIASLPRILYKETDHFMQGEVMECSVCLTTIIEDATIRVLPNCKHMFHVDCVDMWFGSNNTCPVCRAVVEPMVHEHLATPTAPLVEDVGVSQDANHELEKVGCSGLRIASFSRMGISRERSIKNQSSDGCDSVEDVEKQ* 221
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02191 220 SMART ring_2 105 146 IPR001841 -
Rops2g02191 220 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Rops2g02191 220 SUPERFAMILY RING/U-box 87 153 - -
Rops2g02191 220 MobiDBLite consensus disorder prediction 201 220 - -
Rops2g02191 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 153 IPR013083 -
Rops2g02191 220 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 150 IPR044675 -
Rops2g02191 220 Pfam Ring finger domain 104 147 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops2g02191 Rops-Chr2 34869986 34870648 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02191 1 220 C3H Transcription Factor Family AT2G42360 34.016 2.75e-31 113
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02191 K19038 - gmx:100779105 215.312